CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044734_P001	Maize	mitochondrion	88.02	91.4
TraesCS7B01G105600.1	Wheat	mitochondrion	76.25	78.48
TraesCS7D01G201600.1	Wheat	mitochondrion	75.16	78.05
Os06t0248500-00	Rice	mitochondrion	76.47	77.48
HORVU7Hr1G040790.2	Barley	plastid	77.56	72.95
EES05563	Sorghum	mitochondrion	64.05	63.64
TraesCS5A01G088600.1	Wheat	cytosol	42.7	57.31
GSMUA_Achr6P11310_001	Banana	cytosol	44.23	53.42
GSMUA_Achr6P02470_001	Banana	mitochondrion	44.23	53.42
GSMUA_Achr7P18640_001	Banana	mitochondrion	43.79	53.03
EER92576	Sorghum	mitochondrion	50.76	51.32
GSMUA_Achr11P...	Banana	mitochondrion	46.41	50.12
GSMUA_Achr10P...	Banana	cytosol	40.74	49.73
GSMUA_Achr3P02030_001	Banana	plastid	42.92	47.02
VIT_01s0011g06140.t01	Wine grape	mitochondrion	44.01	45.7
KRH48691	Soybean	cytosol	40.74	42.79
KRH39018	Soybean	mitochondrion	40.52	42.47
KRG97963	Soybean	mitochondrion	39.65	42.23
KRH17309	Soybean	cytosol, mitochondrion	39.87	41.69
KRH30918	Soybean	mitochondrion	39.43	41.61
KRH72959	Soybean	cytosol, mitochondrion	39.65	41.55
KXG38738	Sorghum	plastid	44.23	41.09
PGSC0003DMT400058621	Potato	cytosol, mitochondrion	39.43	40.13
Solyc01g005160.2.1	Tomato	mitochondrion	39.22	40.0
Solyc04g008100.1.1	Tomato	cytosol	38.13	39.59
PGSC0003DMT400075778	Potato	mitochondrion	37.25	38.69
Solyc11g006030.1.1	Tomato	cytosol	35.29	37.67
PGSC0003DMT400073836	Potato	cytosol	34.2	37.47
CDY16432	Canola	cytosol	34.42	36.92
AT5G37490.1	Thale cress	cytosol, nucleus, peroxisome	34.64	36.55
Bra039752.1-P	Field mustard	cytosol	33.55	36.49
Bra025442.1-P	Field mustard	mitochondrion	34.64	36.3
CDY50319	Canola	cytosol	33.77	36.3
CDY27655	Canola	mitochondrion	34.42	36.07
CDX99694	Canola	mitochondrion	34.2	35.84
EES06938	Sorghum	extracellular	30.94	34.89
AT1G66160.1	Thale cress	cytosol	31.81	33.87
EES13136	Sorghum	cytosol	30.94	33.33
CDX92016	Canola	mitochondrion	26.58	33.15
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	26.36	32.88
EES03937	Sorghum	plastid	29.19	32.84
Bra001067.1-P	Field mustard	mitochondrion	26.14	32.61
AT3G02840.1	Thale cress	mitochondrion	26.8	32.45
OQU85086	Sorghum	cytosol	29.85	32.08
EES06927	Sorghum	cytosol	29.41	31.84
CDY51529	Canola	mitochondrion	25.71	31.47
CDY28714	Canola	mitochondrion	25.71	31.47
Bra040605.1-P	Field mustard	mitochondrion	25.49	31.2
KXG26241	Sorghum	cytosol	29.19	29.0
OQU81614	Sorghum	cytosol	24.4	28.14
EES11341	Sorghum	cytosol	25.05	27.91
EES05205	Sorghum	cytosol	27.02	27.37
OQU81548	Sorghum	mitochondrion	26.58	27.29
EER95229	Sorghum	cytosol	27.23	27.23
EES07426	Sorghum	cytosol	24.62	26.34
KXG23010	Sorghum	cytosol	24.18	24.45
OQU80253	Sorghum	mitochondrion	11.33	23.85
KXG22102	Sorghum	mitochondrion	23.53	23.63
OQU81292	Sorghum	mitochondrion	10.46	22.33

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A194YIA5	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KXG19704	ProteinID:KXG19704	ProteinID:KXG19704.1	PFAM:PF04564
PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF16	SMART:SM00504	EnsemblPlantsGene:SORBI_3010G102000	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI0007F2BB9B	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:9458742..9460121

Molecular Weight (calculated)

47723.7 Da

IEP (calculated)

8.817

GRAVY (calculated)

0.228

Length

459 amino acids

Sequence
(BLAST)

001: MVLPMSRAAR AASRLVPEIP MLRRSSKQQQ QASAAAEEEQ EVAVPAHFVC PISLDLMRDP VTAPTGITYD RESVEGWLAR GNARCPVTGR PLRLADLVPN
101: HATRRMIQDW CVANRASGVQ RVPTPKVPLA DADAADAVAS VAAAARRGDV AACGAAAARA RALAKESDRN RRCLAAAGAA RALAAAFARL ASERVEGAAA
201: VSCALGDVLA ALTVFFPLDD EARRCIASPS SLKSLVSVMS HGELQARASA AVVLRELASS SSAVDGHTLE AVQRTPGMLD ALVDLVRSPI STSATKAALV
301: TAYYLVAASD RAAARFAELG AVAVLVEALV DADKGTSEKA LAALDGVLCA DAGLAAARAH ALAVPVLVKK MFRVSDMATD FAVSALWRLC RAGDAAGAAA
401: CRAEAVRVGA FQKLLLLLQV GCGGVTKERA SELLKMLNGS RGSVECIETV DFKGLKRPF

Best Arabidopsis Sequence Match ( AT5G37490.1 )
(BLAST)

001: MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF

Arabidopsis Description

PUB21U-box domain-containing protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5PNY6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.