CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003624_P001	Maize	cytosol	89.95	89.5
HORVU2Hr1G076490.1	Barley	mitochondrion	18.34	83.91
Os04t0437300-01	Rice	cytosol	78.14	73.0
TraesCS2D01G305400.1	Wheat	cytosol	73.12	72.75
TraesCS2B01G323600.1	Wheat	cytosol	72.86	72.5
TraesCS2A01G307000.1	Wheat	cytosol	70.35	72.35
GSMUA_Achr2P20690_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	52.01	51.62
GSMUA_Achr7P23310_001	Banana	cytosol, peroxisome, plastid	45.98	45.98
VIT_04s0044g01460.t01	Wine grape	cytosol	43.97	43.86
KRH53906	Soybean	cytosol	41.46	41.88
KRH40934	Soybean	cytosol	39.95	40.98
KRH64033	Soybean	cytosol	40.45	40.97
KRH59579	Soybean	cytosol	38.44	40.91
Solyc05g056500.1.1	Tomato	cytosol	37.69	37.41
PGSC0003DMT400060272	Potato	cytosol	37.19	36.63
EES06938	Sorghum	extracellular	30.9	30.22
EES13136	Sorghum	cytosol	30.9	28.87
EES03937	Sorghum	plastid	27.89	27.21
OQU85086	Sorghum	cytosol	29.15	27.17
EES06927	Sorghum	cytosol	28.64	26.89
EES05205	Sorghum	cytosol	29.65	26.05
OQU81548	Sorghum	mitochondrion	28.14	25.06
EES05563	Sorghum	mitochondrion	28.89	24.89
EER95229	Sorghum	cytosol	28.64	24.84
KXG19704	Sorghum	mitochondrion	28.14	24.4
KXG26241	Sorghum	cytosol	28.14	24.24
EES11341	Sorghum	cytosol	24.87	24.03
KXG22102	Sorghum	mitochondrion	26.63	23.19
EER92576	Sorghum	mitochondrion	25.88	22.69
KXG23010	Sorghum	cytosol	25.63	22.47
EES07426	Sorghum	cytosol	23.62	21.91
KXG38738	Sorghum	plastid	26.63	21.46
OQU80253	Sorghum	mitochondrion	8.79	16.05
OQU81292	Sorghum	mitochondrion	8.29	15.35

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A1Z5RCY2	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:OQU81614	ProteinID:OQU81614	ProteinID:OQU81614.1	PFAM:PF04564
PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF103	SMART:SM00504	EnsemblPlantsGene:SORBI_3006G086400	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI000B423A28	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:45581596..45584458

Molecular Weight (calculated)

41745.6 Da

IEP (calculated)

8.513

GRAVY (calculated)

0.195

Length

398 amino acids

Sequence
(BLAST)

001: MSIPHLFRCP ISLDIFTDPV TLCTGQTYDR PCIERWLAAG HRTCPVTMQP LGDAALVPNR TLRHLIERWL SADHHHQIPD DDAEEPSLAA LKRCLQSGAG
101: ARDKVAALRK AVALASESDV GRACMLQLGF LPVLLQLVFH APTPRDDLSE QEDLALQCAL TLLPTSSPAS PQHGCLNMLK TEASLTSFVA LLAAHGRAVA
201: KCGLCRLLET IATATATRDL ALAAAASPRV WQALLPLLRH GDDRVSGAAV RAVAAICCGA EPARGSAVHH GAVPALLGCL SWASAGNGKA RGGAAAAAWS
301: ALAALEALAA SEAGRRAVAR EPGAVRALVR HVFLMSSSNE GSEHAVAALL AVCRESRAAR SEAAGAGVVT QVLLLLQSQC GTRAKTRARS LLKLFKSM

Best Arabidopsis Sequence Match ( AT5G64660.1 )
(BLAST)

001: MRKDDLCITV PTFFRCPISL DVMKSPVSLC TGVTYDRASI QRWLDGGNNT CPATMQILQN KDFIPNRTLQ RLIEIWSDSV RRRTCVESAE LAAPTRDEIA
101: DAIDRVKIEK EERDDREVLS KIVRFGRESD DNRGFLAGKD DFVKLLVDLI NQVDFETTSA AKSLVVQEAV KILSTIRSKV SDRRRFSNLI LTNGRDRLSV
201: IVYLFKTGNV ELKIDCAGLL EFIAVDAESK LLIAERDGLI TELMKSISKD SDLSLIESSL SCLIAISSPK RVKLNLLREK LIGDVTKLLS DSTSSLSVSV
301: TEKCLKLLEI LASTKEGRSE ICGGDGECLK TVVKKLMKVS TAATEHAVTV LWSVSYLFKE DKALEAVTSV NGVTKILLLL QSNCSPAVRR MLTDLLKVFK
401: VNSRSCLSAY DTKTTHIMPF

Arabidopsis Description

PUB27U-box domain-containing protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.