CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40934	Soybean	cytosol	92.51	89.18
KRH64033	Soybean	cytosol	70.32	66.92
KRH53906	Soybean	cytosol	70.32	66.75
VIT_04s0044g01460.t01	Wine grape	cytosol	54.28	50.88
Solyc05g056500.1.1	Tomato	cytosol	50.8	47.38
PGSC0003DMT400060272	Potato	cytosol	50.0	46.29
HORVU2Hr1G076490.1	Barley	mitochondrion	10.7	45.98
GSMUA_Achr7P23310_001	Banana	cytosol, peroxisome, plastid	42.25	39.7
GSMUA_Achr2P20690_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	41.71	38.9
OQU81614	Sorghum	cytosol	40.91	38.44
Zm00001d003624_P001	Maize	cytosol	40.37	37.75
TraesCS2A01G307000.1	Wheat	cytosol	38.5	37.21
TraesCS2D01G305400.1	Wheat	cytosol	39.3	36.75
TraesCS2B01G323600.1	Wheat	cytosol	39.3	36.75
TraesCS7A01G399900.1	Wheat	extracellular, vacuole	35.56	34.73
TraesCS7D01G393700.1	Wheat	extracellular, vacuole	35.29	34.55
HORVU7Hr1G093780.1	Barley	cytosol, endoplasmic reticulum, extracellular	36.1	34.53
Os04t0437300-01	Rice	cytosol	39.04	34.27
TraesCS7B01G300000.1	Wheat	cytosol, extracellular, nucleus	34.49	33.59
KRH55660	Soybean	cytosol	9.36	28.0
KRH72180	Soybean	cytosol	16.31	26.29
KRH50316	Soybean	cytosol, plasma membrane, plastid	28.07	25.36
KRH26691	Soybean	cytosol	26.2	25.32
KRH22633	Soybean	cytosol, nucleus	27.01	25.06
KRH59546	Soybean	cytosol	27.81	24.88
KRH70657	Soybean	cytosol	27.54	24.82
KRH53869	Soybean	cytosol	27.54	24.7
KRH43397	Soybean	cytosol	27.54	24.64
KRH72176	Soybean	cytosol	26.2	23.45
KRH32856	Soybean	cytosol	26.2	23.33
KRH36899	Soybean	cytosol	22.99	23.18
KRG97963	Soybean	mitochondrion	26.47	22.97
KRH68014	Soybean	cytosol	25.13	22.38
KRH68013	Soybean	cytosol	17.38	21.96
KRG96257	Soybean	cytosol	24.6	21.96
KRH39018	Soybean	mitochondrion	25.67	21.92
KRH30918	Soybean	mitochondrion	25.4	21.84
KRG96268	Soybean	cytosol	24.33	21.72
KRH48691	Soybean	cytosol	24.87	21.28
KRH35744	Soybean	cytosol	23.8	21.24
KRH72959	Soybean	cytosol, mitochondrion	24.87	21.23
KRH25324	Soybean	cytosol	20.59	21.21
KRH17309	Soybean	cytosol, mitochondrion	24.87	21.18
KRH52124	Soybean	cytosol	24.06	21.18
KRH61438	Soybean	cytosol	23.8	21.09
KRH05554	Soybean	cytosol	23.26	20.76
KRG88755	Soybean	cytosol	23.8	20.7
KRH22634	Soybean	cytosol	23.26	20.62
KRH26690	Soybean	cytosol	23.53	20.61
KRH25323	Soybean	cytosol	22.19	20.54
KRH77156	Soybean	cytosol	24.33	20.27
KRG88869	Soybean	cytosol	22.19	19.9
KRH70331	Soybean	mitochondrion	21.39	19.66
KRH58142	Soybean	cytosol	23.26	19.59
KRH08734	Soybean	mitochondrion	21.12	19.08
KRH28330	Soybean	plastid	24.6	17.9

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02003333	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_05G192100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	UniProt:K7KR67	EnsemblPlants:KRH59579	ProteinID:KRH59579
ProteinID:KRH59579.1	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF103	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI00029485CE	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:37758329..37759485

Molecular Weight (calculated)

41846.8 Da

IEP (calculated)

5.644

GRAVY (calculated)

-0.034

Length

374 amino acids

Sequence
(BLAST)

001: MNESQNAIPH LFRCPISLDL LEDPVTLCTG QTYDRSNIEK WLALGNLTCP VTMQKLHDPS IVPNHTLRHL IDQWLQLCHQ FDPANPEAST IDSLASLKSN
101: IESHESSLEN KFQALGKISL LSDEYCSFNK SCFFQLDFLP QLLELVFGTQ VSPEIDMNFI ELALCCIKKL LPLGSLEPLN MIKDGSKLTT FVLLFEKGTN
201: SVKTSLCRVI ESSSSSSETE DLCSTLGNSH KLVHEIVQVV NQNYEVSGDA IKAILVRGGA IEEIMRYITS ERRNMAPVAM RIIEKVMWLK SAKEALVKHP
301: NGVQTMVNMV FRVSDQECSE SAVEVLLTVC GEFERAREEA IESGVLTRLL LLLQSQCSNP TKSKARMLLK LLRS

Best Arabidopsis Sequence Match ( AT3G19380.1 )
(BLAST)

001: MPRNIEPLDL GIQIPYHFRC PISLELMQDP VTVCTGQTYD RASIESWVSI GNNTTCPVTR APLSDFTLIP NHTLRRLIQE WCVANRSNGV ERIPTPKQPA
101: DPTSVRALLS QASAITGTHV SVRSRAAALR RLRGFARDSD KNRVLIAAHN ATEILIKILF SETTSSELVS ESLALLVMLP ITEPNQFVSI SSDPGRVEFL
201: TRLLFDSSIE TRVNAAALIE IVSTGTKSAD LKGSISNSES VFEGVLDLLR NPISSRRALK IGIKTLFALC SVKSTRHIAI TAGAPEILID RLAADFDRCD
301: TERALATVEL LCRTPEGCAA FGEHALTVPL LVKTILRVSD RATEYAAGAL LALCTAEERW REEAAGAGVV VQLLLMVQSE CTERAKKKAQ KLLKLLRDSW
401: PDYNSFANSD DFGCSSQVVP F

Arabidopsis Description

PUB25U-box domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT79]
SUBAcon: [golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.