Factsheet for TraesCS2D01G449900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G471900.1	Wheat	cytosol	97.61	97.61
TraesCS2A01G450300.1	Wheat	cytosol	97.13	97.36
EES11341	Sorghum	cytosol	77.99	79.13
Os04t0589700-01	Rice	cytosol	77.51	76.96
Zm00001d026040_P001	Maize	cytosol	75.12	76.77
Zm00001d002498_P001	Maize	cytosol	75.36	75.9
TraesCS6D01G251200.1	Wheat	cytosol	68.9	66.67
GSMUA_Achr3P18060_001	Banana	cytosol	45.93	50.39
PGSC0003DMT400004594	Potato	cytosol	41.39	42.51
Solyc01g080920.2.1	Tomato	cytosol	41.39	42.3
GSMUA_Achr5P13860_001	Banana	cytosol	29.9	41.25
TraesCS3D01G370000.1	Wheat	cytosol	30.62	30.62
TraesCS6D01G167300.1	Wheat	cytosol	30.38	29.33
TraesCS6D01G367100.1	Wheat	cytosol	28.71	28.57
TraesCS6D01G367600.1	Wheat	cytosol	28.71	28.37
TraesCS2D01G296100.1	Wheat	cytosol	29.19	28.31
TraesCS2D01G594700.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	28.71	28.1
TraesCS4D01G229900.1	Wheat	mitochondrion	27.51	26.14
TraesCS6D01G237900.1	Wheat	extracellular	24.4	25.06
TraesCS2D01G305400.1	Wheat	cytosol	23.45	24.5
TraesCS7D01G201600.1	Wheat	mitochondrion	25.12	23.76
TraesCS7D01G393700.1	Wheat	extracellular, vacuole	21.53	23.56
TraesCS6D01G292200.1	Wheat	mitochondrion	24.64	22.69
TraesCS4D01G237600.1	Wheat	cytosol	24.88	22.66
TraesCS2D01G296700.1	Wheat	cytosol, mitochondrion, plastid	22.73	21.54
TraesCS1D01G274600.1	Wheat	mitochondrion	23.21	21.41

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF23	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS2D01G449900	EnsemblPlants:TraesCS2D01G449900.1	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16664	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:559310675..559311931

Molecular Weight (calculated)

45120.9 Da

IEP (calculated)

8.093

GRAVY (calculated)

0.087

Length

418 amino acids

Sequence
(BLAST)

001: MAMEESPQLF LCPISMELME DPVTVSTGVT YDRRSIERWF FKYGKTTCPA TMQRVASLDL TPNHTLKRVI ASWQDRASTS SSGPSSPADA LKPMARERLP
101: SVLAGIEGTP FKVTALKGLR LCMAGDQVAR DDFVACDGIQ VLGRVMAQAL AESGAGGEFS AFRTCEEAAA VLATLPLSDE ESVDLVLRPE CMRPMVALVQ
201: RGSAEARLHA MSILAKVSEA SGARNWTDDV DVDDMVKSLL DLLSDGASSK LSSRALDVLI DVTARSRSRG ARRGKGVVEV GAVRVLVELL PEADGHVAER
301: ALLLLKRLCK CPEGRLAFAE HGLAVAAVVR TVLRVSGLAT RLAVNVLWLV SCAARPTERV LDDMVASGGV AKLLALLQAD SSPSTKEKVA RMLRVHGAFW
401: RQYPCIPADL KDYLKFLK

Best Arabidopsis Sequence Match ( AT5G65920.2 )
(BLAST)

001: MPMFQPSKNG GFDGHILDLH SAVKDGVLGG GDGKFLVVVT DEKKKLDLKE MISELELPEI PSVFICPISL EPMQDPVTLC TGQTYERSNI LKWFNIGHCT
101: CPTTMQELWD DLVTPNKTLH QLIYTWFSQK YVLMKKRSED VQGRAIEILG TLRKAKGKAK VHALSELKQV VMAHAIAKKT VVDEGGVFVI SSLLSPFTSH
201: AVGSEAIAIL VNLELDSDSK AGLMQPARVS LMVDMLNDGS IETKINCARL IGRLVEEKGF RAELVSSHSL LVGLMRLVKD RRRRNGVSPA LTLLKSVSVH
301: KQVRNLLVRI GAVPQLVDVL PCLDVECLES ALFVLDSLCL ESEGRIALKD SVNTIPHTVR LLMKVSEKCT NYAISILWSV CKLASEECSS LAVEVGLAAK
401: LLLVIQSGCD PALKQRSAEL LKLCSLHYSD SMFISKCKLT RTIQ

Arabidopsis Description

PUB31U-box domain-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.