Factsheet for TraesCS2A01G450300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G449900.1	Wheat	cytosol	97.36	97.13
TraesCS2B01G471900.1	Wheat	cytosol	97.36	97.13
EES11341	Sorghum	cytosol	78.66	79.61
Os04t0589700-01	Rice	cytosol	78.18	77.43
Zm00001d026040_P001	Maize	cytosol	75.78	77.26
Zm00001d002498_P001	Maize	cytosol	76.02	76.39
TraesCS6A01G263700.1	Wheat	cytosol	68.59	66.51
GSMUA_Achr3P18060_001	Banana	cytosol	46.28	50.66
PGSC0003DMT400004594	Potato	cytosol	41.49	42.51
Solyc01g080920.2.1	Tomato	cytosol	41.49	42.3
GSMUA_Achr5P13860_001	Banana	cytosol	29.74	40.92
TraesCS3A01G376900.1	Wheat	cytosol	30.7	30.62
TraesCS6A01G382300.1	Wheat	cytosol	29.5	29.15
TraesCS6A01G176800.1	Wheat	cytosol	29.98	28.94
TraesCS6A01G382800.1	Wheat	cytosol	28.78	28.44
TraesCS2A01G298000.1	Wheat	cytosol	28.78	27.84
TraesCS6A01G256700.1	Wheat	extracellular	23.98	24.57
TraesCS2A01G307000.1	Wheat	cytosol	22.54	24.29
TraesCS7A01G399900.1	Wheat	extracellular, vacuole	21.34	23.24
TraesCS6A01G312600.1	Wheat	mitochondrion	24.94	22.86
TraesCS4A01G060800.1	Wheat	cytosol	24.94	22.66
TraesCS1A01G274800.1	Wheat	mitochondrion	23.26	21.41
TraesCS2A01G298600.1	Wheat	cytosol, mitochondrion, plastid	22.3	21.09
TraesCS5A01G088600.1	Wheat	cytosol	16.55	20.18

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF23	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS2A01G450300	EnsemblPlants:TraesCS2A01G450300.1	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16664	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:699867533..699869031

Molecular Weight (calculated)

45154.9 Da

IEP (calculated)

8.262

GRAVY (calculated)

0.052

Length

417 amino acids

Sequence
(BLAST)

001: MATEESPQLF LCPISMELME DPVTVSTGVT YDRRSIERWF FKYGKTTCPA TMQRVASFDL TPNHTLKRVI ASWQDRASTS SSSSPADALK PMPRERLPSV
101: LAGIEGTPFK VTALKGLRLC MAADQAARED FVACDGIQVL GRVMAQALAE SGAGGDFSAF RTCEEAAAVL ATLPLSDEES VDLVLRPECM RPMVALVQRG
201: SAEARLHAMS ILAKVSEASG ARNWTEDVDV DDMVKSLLDL LSDGASSKLS SRALDVLIDV TARSRSRGGA RRGKGVVEVG AVRVLVELLP EADRHVAERA
301: LLLLKRLCKC PEGRLAFAEH GLAVAAVVRT TLRVSGLATR LAVNVLWLVS CAARPTERVL DDMVASGGVA KLLALLQADS SPSTKEKVAR MLRVHGAFWR
401: QYPCIPADLK DYLKFLK

Best Arabidopsis Sequence Match ( AT5G65920.2 )
(BLAST)

001: MPMFQPSKNG GFDGHILDLH SAVKDGVLGG GDGKFLVVVT DEKKKLDLKE MISELELPEI PSVFICPISL EPMQDPVTLC TGQTYERSNI LKWFNIGHCT
101: CPTTMQELWD DLVTPNKTLH QLIYTWFSQK YVLMKKRSED VQGRAIEILG TLRKAKGKAK VHALSELKQV VMAHAIAKKT VVDEGGVFVI SSLLSPFTSH
201: AVGSEAIAIL VNLELDSDSK AGLMQPARVS LMVDMLNDGS IETKINCARL IGRLVEEKGF RAELVSSHSL LVGLMRLVKD RRRRNGVSPA LTLLKSVSVH
301: KQVRNLLVRI GAVPQLVDVL PCLDVECLES ALFVLDSLCL ESEGRIALKD SVNTIPHTVR LLMKVSEKCT NYAISILWSV CKLASEECSS LAVEVGLAAK
401: LLLVIQSGCD PALKQRSAEL LKLCSLHYSD SMFISKCKLT RTIQ

Arabidopsis Description

PUB31U-box domain-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.