Factsheet for Os04t0589700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11341	Sorghum	cytosol	77.43	79.13
TraesCS2A01G450300.1	Wheat	cytosol	77.43	78.18
Zm00001d026040_P001	Maize	cytosol	75.77	78.0
TraesCS2B01G471900.1	Wheat	cytosol	77.2	77.75
TraesCS2D01G449900.1	Wheat	cytosol	76.96	77.51
Zm00001d002498_P001	Maize	cytosol	76.01	77.11
Os02t0690600-01	Rice	cytosol	68.65	68.0
GSMUA_Achr3P18060_001	Banana	cytosol	47.98	53.02
PGSC0003DMT400004594	Potato	cytosol	40.14	41.52
Solyc01g080920.2.1	Tomato	cytosol	39.91	41.08
GSMUA_Achr5P13860_001	Banana	cytosol	29.45	40.92
Os04t0686000-01	Rice	cytosol	31.35	31.96
Os01t0865700-00	Rice	plastid	29.69	30.71
Os12t0161100-00	Rice	cytosol	30.4	29.16
Os02t0539200-01	Rice	cytosol	30.17	28.73
Os03t0240600-01	Rice	plastid	25.89	24.49
Os02t0548700-00	Rice	cytosol, extracellular, plastid	24.23	24.46
Os05t0439400-01	Rice	plasma membrane	25.42	23.67
Os06t0248500-00	Rice	mitochondrion	24.47	22.74
Os04t0418500-01	Rice	plastid	24.23	22.62
Os04t0437300-01	Rice	cytosol	22.57	22.3
Os02t0738200-01	Rice	mitochondrion	23.75	21.93
Os02t0540700-00	Rice	plastid	25.42	21.19
Os03t0232600-01	Rice	cytosol	22.8	20.91

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:4336814	EMBL:AK070506	InterPro:ARM-like
InterPro:ARM-type_fold	ProteinID:BAF15614.1	ProteinID:BAS90736.1	ProteinID:CAE04863.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083
EnsemblPlantsGene:Os04g0589700	EnsemblPlants:Os04t0589700-01	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF23
UniProt:Q7XLZ8	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI00001B19E3	InterPro:Ubox_domain
RefSeq:XP_015635733.1	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

plant U-box-containing protein 35, U-box protein 35Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04t0589700-01)

Coordinates

chr4:+:29809222..29810808

Molecular Weight (calculated)

45425.1 Da

IEP (calculated)

7.893

GRAVY (calculated)

0.082

Length

421 amino acids

Sequence
(BLAST)

001: MAMEPPPLFL CPISMELMED PVTVATGVTY DRRSIERWFF KYGKTTCPAT MQRLASFDFT PNHTLKRVIS SWLDRASSSS SPSTAGSPAT TSSSSSSNAM
101: ERERLPSVLA GIEETPFKAT ALKNLKSCMA GDEAAREDFV ACGGIQVLGR VMTQALEESS AGGDFSAFRT CEEAAAVLAT LPLSDDASVE LLLKPECIRP
201: VSVLVQRGSA EARLHAMSMI SKISRASVRD WTAEVDVDDM VKALLELLSD GASAKLSSRA LDVLLDVTAR YSRGARRAKA VELGAVRVLA ELLLDADRHV
301: AERSLLLLKR MCKCPEGRLA FAEHGLAVAA VARAVLRVSG LATRLAVNVL WLVACAPAPA ERVLEDMVVG GAVAKLLALM QVESSPSTKD KAVKMLRAHG
401: AFWRQYPCFP TDLKDYLKSL N

Best Arabidopsis Sequence Match ( AT3G52450.1 )
(BLAST)

001: MDQEIEIPSF FLCPISLDIM KDPVIVSTGI TYDRESIEKW LFSGKKNSCP VTKQVITETD LTPNHTLRRL IQSWCTLNAS YGIERIPTPK PPICKSEIEK
101: LIKESSSSHL NQVKCLKRLR QIVSENTTNK RCLEAAEVPE FLANIVSNSV DTYNSPSSSL SSSNLNDMCQ SNMLENRFDS SRSLMDEALS VLYHLDTSET
201: ALKSLLNNKK GTNLVKTLTK IMQRGIYESR AYAALLLKKL LEVADPMQII LLERELFGEV IQILHDQISH KATRSAMQIL VITCPWGRNR HKAVEGGTIS
301: MIIELLMDDT FSSERRNSEM AMVVLDMLCQ CAEGRAEFLN HGAAIAVVSK KILRVSQITS ERAVRVLLSV GRFCATPSLL QEMLQLGVVA KLCLVLQVSC
401: GNKTKEKAKE LLKLHARVWR ESPCVPRNLY DSYPA

Arabidopsis Description

PUB22RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VML4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.