Factsheet for Bra037833.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18670	Canola	cytosol	99.77	99.77
AT5G65920.1	Thale cress	cytosol	83.75	83.56
Bra029975.1-P	Field mustard	cytosol	76.98	76.98
VIT_00s0471g00010.t01	Wine grape	cytosol	70.65	70.02
Zm00001d019807_P001	Maize	extracellular	14.0	65.96
KRH77156	Soybean	cytosol	66.82	65.92
GSMUA_Achr8P04940_001	Banana	cytosol	63.88	65.51
KRH58142	Soybean	cytosol	65.24	65.09
GSMUA_Achr2P08620_001	Banana	cytosol	63.21	64.52
GSMUA_Achr3P25750_001	Banana	cytosol	61.17	63.17
EER95229	Sorghum	cytosol	59.82	57.73
KRH28330	Soybean	plastid	66.82	57.59
Zm00001d028294_P001	Maize	cytosol	59.59	57.52
GSMUA_Achr4P07400_001	Banana	cytosol	55.98	57.14
Os03t0232600-01	Rice	cytosol	58.92	56.86
Zm00001d048008_P001	Maize	cytosol	59.37	56.8
HORVU4Hr1G066070.1	Barley	cytosol	58.24	56.09
TraesCS4B01G236200.1	Wheat	cytosol	58.01	55.99
TraesCS4D01G237600.1	Wheat	cytosol	58.01	55.99
TraesCS4A01G060800.1	Wheat	cytosol	57.79	55.77
Zm00001d000044_P001	Maize	cytosol	21.44	41.13
Bra038205.1-P	Field mustard	cytosol	25.06	26.62
Bra022417.1-P	Field mustard	cytosol	25.06	26.3
Bra022415.1-P	Field mustard	cytosol	25.06	26.3
Bra024318.1-P	Field mustard	cytosol	24.38	25.78
Bra014206.1-P	Field mustard	cytosol	23.25	24.35
Bra012803.1-P	Field mustard	cytosol	23.02	24.11
Bra023044.1-P	Field mustard	cytosol	22.12	23.96
Bra017278.1-P	Field mustard	cytosol	22.12	23.79
Bra037568.1-P	Field mustard	cytosol	22.12	23.73
Bra001717.1-P	Field mustard	cytosol	22.57	23.58
Bra039752.1-P	Field mustard	cytosol	22.35	23.46
Bra033430.1-P	Field mustard	cytosol	22.35	23.35
Bra006925.1-P	Field mustard	cytosol	22.57	22.99
Bra022347.1-P	Field mustard	cytosol	21.67	22.64
Bra005309.1-P	Field mustard	cytosol	18.96	21.71
Bra025442.1-P	Field mustard	mitochondrion	20.99	21.23
Bra040605.1-P	Field mustard	mitochondrion	17.83	21.07
Bra001067.1-P	Field mustard	mitochondrion	16.7	20.11
Bra001424.1-P	Field mustard	cytosol	20.99	19.87
Bra038683.1-P	Field mustard	cytosol	19.86	19.69
Bra034806.1-P	Field mustard	cytosol	20.54	19.49

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra037833
EnsemblPlants:Bra037833.1	EnsemblPlants:Bra037833.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	UniProt:M4F9S0	PFAM:PF04564
PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF105	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI0002541BAF	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT5G65920 (E=5e-206) | U-box domain-containing protein

Coordinates

chrA09:-:3831201..3832532

Molecular Weight (calculated)

48229.3 Da

IEP (calculated)

7.445

GRAVY (calculated)

0.146

Length

443 amino acids

Sequence
(BLAST)

001: MPMFQPFKGG GFDGHVIDLH TAVKDGVLGG GDGGDGKTAA AENELDLKTM ITNLELQETP SVFICPISLD PMQDPVTLCT GQTYERSNIL KWLSLGHRTC
101: PTTMQELWDD AVTPNKTLHQ LIHAWFSQKY VMMKKRSEDV QGRVIEIVGA LRKAKGKEKV HALSELKGVV MAHEIAKKSV VEEGGVFVIS SLLTPFTSHA
201: VGSEAVAILV NLELDAVSKA GLMQPARVSL MVDMLNDGSI ETKINCARLI GRLVEERGFR VELVSSHSLL VGLMRLVKDR RRRNGVSPAL ALLKSITVHK
301: QVRSLMVSVE AVPQLVDVLP CLGPECLESA LYVLDSLCSD NEGVTALKES VNTIPNTVRL LMRVSETCTA YAVSILWSVC RLASRECSSL AVELGLAAKL
401: LLVIQSGCDP ALKQRSAELL KLCSLHYSDT MFISKCKLAP TIQ

Best Arabidopsis Sequence Match ( AT5G65920.2 )
(BLAST)

001: MPMFQPSKNG GFDGHILDLH SAVKDGVLGG GDGKFLVVVT DEKKKLDLKE MISELELPEI PSVFICPISL EPMQDPVTLC TGQTYERSNI LKWFNIGHCT
101: CPTTMQELWD DLVTPNKTLH QLIYTWFSQK YVLMKKRSED VQGRAIEILG TLRKAKGKAK VHALSELKQV VMAHAIAKKT VVDEGGVFVI SSLLSPFTSH
201: AVGSEAIAIL VNLELDSDSK AGLMQPARVS LMVDMLNDGS IETKINCARL IGRLVEEKGF RAELVSSHSL LVGLMRLVKD RRRRNGVSPA LTLLKSVSVH
301: KQVRNLLVRI GAVPQLVDVL PCLDVECLES ALFVLDSLCL ESEGRIALKD SVNTIPHTVR LLMKVSEKCT NYAISILWSV CKLASEECSS LAVEVGLAAK
401: LLLVIQSGCD PALKQRSAEL LKLCSLHYSD SMFISKCKLT RTIQ

Arabidopsis Description

PUB31U-box domain-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.