Factsheet for HORVU6Hr1G077280.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G074180.1
HORVU2Hr1G074130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33945.1	HORVU1Hr1G074180.1	AT5G09800.1	21798944
AT4G33945.1	HORVU2Hr1G074130.1	AT5G09800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G313600.1	Wheat	cytosol	88.1	95.62
TraesCS6D01G293000.1	Wheat	cytosol	88.1	95.62
TraesCS6B01G343700.1	Wheat	cytosol	87.9	95.4
Os02t0761200-01	Rice	cytosol	76.81	82.29
KXG31158	Sorghum	cytosol	73.99	79.78
Zm00001d018144_P003	Maize	cytosol	72.58	72.87
GSMUA_Achr3P06810_001	Banana	cytosol	55.24	58.8
VIT_03s0063g01020.t01	Wine grape	cytosol	53.23	57.39
CDX69015	Canola	cytosol	51.81	56.61
Bra011480.1-P	Field mustard	cytosol	51.61	56.39
CDX75390	Canola	cytosol	51.61	56.39
AT4G33945.1	Thale cress	cytosol	51.61	55.17
PGSC0003DMT400059061	Potato	cytosol	50.6	54.45
Solyc11g044870.1.1	Tomato	cytosol	50.6	54.45
KRH49769	Soybean	plastid	46.37	49.36
KRG89234	Soybean	cytosol, extracellular	18.35	49.19

Protein Annotations

EnsemblPlants:HORVU6Hr1G077280.1	EnsemblPlantsGene:HORVU6Hr1G077280	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989	PANTHER:PTHR22895
PANTHER:PTHR22895:SF0	SEG:seg	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000B48453C	UniProt:A0A287USF7
MapMan:13.2.5.1.3	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:529454611..529458665

Molecular Weight (calculated)

52884.7 Da

IEP (calculated)

4.762

GRAVY (calculated)

0.002

Length

496 amino acids

Sequence
(BLAST)

001: SCPDICPRGA ETPHQTLLLP TLPSVHSAVR TEKQQAGQEM AIAISQEAFD DMVRENMEDL GMDPEEALAD AVDALTLQGA NLSGIIRRVP GDASAEEVNP
101: VMRVLDELKA SSSGRSGEDL DRLAPLLDEL LELCSGEGAE NAAVAARNGG VEALVALCSS AGVKQERLLA SGLKALSSLI RDVGSTEKFR QSQGPKIVMD
201: ILNGALENTD VLDGGFGVVA MASAGNEVVK DAFMDLKVDE LILEVMRNKS NSKVQSVYDA IRVLLTPDDN RVVASQVYGY SRKFAEIGVA EVLVIALRKQ
301: VAPSSLPSAC AALKAIAVNE EICRSISENG GIDVLLKCID EAGVQKNKVI AKSCCSLLSK LAGSDANKAN IIQQDGFDKF LTLVSRFSED PSVIQEVMSM
401: VQILTLRSPE HAARAVALGY GTLAIQTMQK FPSSALTQKQ ACLMIRNLVV RNPENRTILL NEGVEKLIRK AKAIHGSCKA AATDALRDLG LDNYNA

Best Arabidopsis Sequence Match ( AT4G33945.1 )
(BLAST)

001: MGVRTISQEA FDDLVRENVE DLGMDPSEAL EDALYTLKLQ GVDLFGIITC VPGESSVKDN PVIACLDRLK EFDSVSIDGP LRDEVFDEIS SLFKNLNELC
101: SSQESGNAAI ATKHGAVDLT CSICSKIKIS TRSNRVLVPC FKALAVLIRD IQSTERFRNC TGPNIVVDLL NDSSSDSDLL DAGFAVVAAA ATGNEVVKQL
201: FMELKIDELI LQVLNRESKT TIRALYDAIC ALLTPDDFRV VASQVYGYAR TFAKLGIATA LTEALQAGIG SDSLVSASTA LKAIAVNDEI CKSIAESGGI
301: DTLLRCIDDS GEQGNKTAAK TCCSLLSKLA GSDSNKSTIV EKQGLDKLIT LALRFSDDPL VIQEVMLIIS IICLRSPDHA AKAIEAGAGD LAVQAMKRFP
401: VAAQMQRNAC NMIRNIAVRS AENRTILLAN GIEKLIRTAK ANNETCRAAA TDALRDLGLD NYNN

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.