Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Zm00001d016719_P001 | |
Zm00001d025379_P001 | |
Zm00001d038280_P001 | |
Zm00001d050689_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG31158 | Sorghum | cytosol | 86.44 | 92.83 |
Os02t0761200-01 | Rice | cytosol | 75.71 | 80.78 |
TraesCS6A01G313600.1 | Wheat | cytosol | 74.09 | 80.09 |
TraesCS6D01G293000.1 | Wheat | cytosol | 73.68 | 79.65 |
TraesCS6B01G343700.1 | Wheat | cytosol | 73.28 | 79.21 |
HORVU6Hr1G077280.1 | Barley | cytosol | 72.87 | 72.58 |
VIT_03s0063g01020.t01 | Wine grape | cytosol | 54.45 | 58.48 |
GSMUA_Achr3P06810_001 | Banana | cytosol | 54.66 | 57.94 |
CDX69015 | Canola | cytosol | 51.62 | 56.17 |
CDX75390 | Canola | cytosol | 51.62 | 56.17 |
Bra011480.1-P | Field mustard | cytosol | 51.21 | 55.73 |
Solyc11g044870.1.1 | Tomato | cytosol | 51.01 | 54.66 |
PGSC0003DMT400059061 | Potato | cytosol | 51.01 | 54.66 |
AT4G33945.1 | Thale cress | cytosol | 50.0 | 53.23 |
KRG89234 | Soybean | cytosol, extracellular | 18.62 | 49.73 |
KRH49769 | Soybean | plastid | 46.56 | 49.36 |
Zm00001d005332_P001 | Maize | cytosol | 20.85 | 49.05 |
Protein Annotations
EnsemblPlants:Zm00001d018144_P003 | EnsemblPlants:Zm00001d018144_T003 | EnsemblPlantsGene:Zm00001d018144 | EntrezGene:100191403 | Gene3D:1.25.10.10 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | InterPro:IPR000225 |
InterPro:IPR011989 | PANTHER:PTHR22895 | PANTHER:PTHR22895:SF0 | ProteinID:AQK75130.1 | SEG:seg | SMART:SM00185 |
SUPFAM:SSF48371 | UniParc:UPI0008454BE8 | UniProt:A0A1D6HL30 | MapMan:13.2.5.1.3 | : | : |
Description
ARM repeat superfamily protein
Coordinates
chr5:-:215392664..215396428
Molecular Weight (calculated)
52956.4 Da
IEP (calculated)
4.718
GRAVY (calculated)
-0.034
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISISQEAF DSMVRENMED LGMDPDEALA DAVEALTLQG ADLSGNTFRQ IRTSTFSALS QSPPSTSLLR AGIVKRVPGE ATAAEVSPVV RVLDELKASL
101: SASGGSEQDL DGLVSLLDEL RNLCCSGEGS ENAAIAVRNG VVEALVALCA SARVEQERLL ASALKSLSSV LRDVASTEKF RRSEGPRIVM DLLQGGSENS
201: DLLDAGFSVV AAGSAGNEVV KESFMDLKVD ELILRVMKDK SKSNVQSLYD AIRVLLKPDD NRVVASQIEY ELGQVYGYSR RFAEIGVAEV LVNALREQVA
301: PSSLPSACAA LKSIAVNDEI CRSISENGGI DVLLQCIDGA GEQKNKAVAR SCCSLLSKLA ASDANKSIII QRGGFDRFLK LTSRFSEDPA IIQEVMSMVT
401: VLTLRSPENA ARAMEEGYGT LAIQSMQRFP SSVQTQKQAC LMIRNLVARN PENRIVLLND GAEKLIRKAM ALHRSCKDAA SSALRDLGLD NYNA
101: SASGGSEQDL DGLVSLLDEL RNLCCSGEGS ENAAIAVRNG VVEALVALCA SARVEQERLL ASALKSLSSV LRDVASTEKF RRSEGPRIVM DLLQGGSENS
201: DLLDAGFSVV AAGSAGNEVV KESFMDLKVD ELILRVMKDK SKSNVQSLYD AIRVLLKPDD NRVVASQIEY ELGQVYGYSR RFAEIGVAEV LVNALREQVA
301: PSSLPSACAA LKSIAVNDEI CRSISENGGI DVLLQCIDGA GEQKNKAVAR SCCSLLSKLA ASDANKSIII QRGGFDRFLK LTSRFSEDPA IIQEVMSMVT
401: VLTLRSPENA ARAMEEGYGT LAIQSMQRFP SSVQTQKQAC LMIRNLVARN PENRIVLLND GAEKLIRKAM ALHRSCKDAA SSALRDLGLD NYNA
001: MGVRTISQEA FDDLVRENVE DLGMDPSEAL EDALYTLKLQ GVDLFGIITC VPGESSVKDN PVIACLDRLK EFDSVSIDGP LRDEVFDEIS SLFKNLNELC
101: SSQESGNAAI ATKHGAVDLT CSICSKIKIS TRSNRVLVPC FKALAVLIRD IQSTERFRNC TGPNIVVDLL NDSSSDSDLL DAGFAVVAAA ATGNEVVKQL
201: FMELKIDELI LQVLNRESKT TIRALYDAIC ALLTPDDFRV VASQVYGYAR TFAKLGIATA LTEALQAGIG SDSLVSASTA LKAIAVNDEI CKSIAESGGI
301: DTLLRCIDDS GEQGNKTAAK TCCSLLSKLA GSDSNKSTIV EKQGLDKLIT LALRFSDDPL VIQEVMLIIS IICLRSPDHA AKAIEAGAGD LAVQAMKRFP
401: VAAQMQRNAC NMIRNIAVRS AENRTILLAN GIEKLIRTAK ANNETCRAAA TDALRDLGLD NYNN
101: SSQESGNAAI ATKHGAVDLT CSICSKIKIS TRSNRVLVPC FKALAVLIRD IQSTERFRNC TGPNIVVDLL NDSSSDSDLL DAGFAVVAAA ATGNEVVKQL
201: FMELKIDELI LQVLNRESKT TIRALYDAIC ALLTPDDFRV VASQVYGYAR TFAKLGIATA LTEALQAGIG SDSLVSASTA LKAIAVNDEI CKSIAESGGI
301: DTLLRCIDDS GEQGNKTAAK TCCSLLSKLA GSDSNKSTIV EKQGLDKLIT LALRFSDDPL VIQEVMLIIS IICLRSPDHA AKAIEAGAGD LAVQAMKRFP
401: VAAQMQRNAC NMIRNIAVRS AENRTILLAN GIEKLIRTAK ANNETCRAAA TDALRDLGLD NYNN
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Z0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.