Factsheet for Solyc11g044870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc11g005700.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33945.1	Solyc11g005700.1.1	AT5G09800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059061	Potato	cytosol	96.96	96.96
VIT_03s0063g01020.t01	Wine grape	cytosol	65.08	65.22
CDX69015	Canola	cytosol	60.74	61.67
CDX75390	Canola	cytosol	60.09	61.01
Bra011480.1-P	Field mustard	cytosol	59.87	60.79
GSMUA_Achr3P06810_001	Banana	cytosol	61.39	60.73
AT4G33945.1	Thale cress	cytosol	59.87	59.48
KRH49769	Soybean	plastid	56.4	55.79
Os02t0761200-01	Rice	cytosol	55.75	55.51
TraesCS6D01G293000.1	Wheat	cytosol	54.88	55.36
KXG31158	Sorghum	cytosol	55.1	55.22
TraesCS6A01G313600.1	Wheat	cytosol	54.66	55.14
TraesCS6B01G343700.1	Wheat	cytosol	54.01	54.49
KRG89234	Soybean	cytosol, extracellular	21.69	54.05
Zm00001d018144_P003	Maize	cytosol	54.66	51.01
HORVU6Hr1G077280.1	Barley	cytosol	54.45	50.6
Zm00001d005332_P001	Maize	cytosol	13.45	29.52

Protein Annotations

EnsemblPlants:Solyc11g044870.1.1	EnsemblPlantsGene:Solyc11g044870.1	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989	PANTHER:PTHR22895
PANTHER:PTHR22895:SF0	SEG:seg	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000276A471	UniProt:K4D8F2
MapMan:13.2.5.1.3	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:32138887..32146917

Molecular Weight (calculated)

49814.2 Da

IEP (calculated)

4.748

GRAVY (calculated)

0.030

Length

461 amino acids

Sequence
(BLAST)

001: MAPPKSVRSI SQQAFDELVK ENIEDLGMDS TEALEDAIQT LTLQGVDLSG IVTSILGSGE ENPVIQSLEK LKELDRDCKQ GDGDETDVKE IIEWLDKLND
101: ACHVDGSGNA AIATKNGAIE LVCSICGKLG SEGLVSALKT LVSLLHDLQS TEIFREIKGP KMVMNILNNR KENISILNSG FAVVSAAATG NEVLKEAFMN
201: LKIDELILQC LREFSRGSIP CLYDAVHVLL TSDDNRVVAS EVYGYARRFA KIGIVEALVD SLHDGIKASS LVSASVALKA IAVNDEICRA VAENGGIDAI
301: LRCIDDSSEQ GEKVVAITCC SLLSKLAGSD INKSAIVDKD GMNKLMKLAT RFSNDPAVLH EVMSMITVLS LRSPHNAACA IEAGAGDIVI QAMQRFPESE
401: LLQRSCCFMI RNLVVRNPEN RTILLGNGIE KLIRKAKMNY KSCKNAATDA LRDLGLDNYN L

Best Arabidopsis Sequence Match ( AT4G33945.1 )
(BLAST)

001: MGVRTISQEA FDDLVRENVE DLGMDPSEAL EDALYTLKLQ GVDLFGIITC VPGESSVKDN PVIACLDRLK EFDSVSIDGP LRDEVFDEIS SLFKNLNELC
101: SSQESGNAAI ATKHGAVDLT CSICSKIKIS TRSNRVLVPC FKALAVLIRD IQSTERFRNC TGPNIVVDLL NDSSSDSDLL DAGFAVVAAA ATGNEVVKQL
201: FMELKIDELI LQVLNRESKT TIRALYDAIC ALLTPDDFRV VASQVYGYAR TFAKLGIATA LTEALQAGIG SDSLVSASTA LKAIAVNDEI CKSIAESGGI
301: DTLLRCIDDS GEQGNKTAAK TCCSLLSKLA GSDSNKSTIV EKQGLDKLIT LALRFSDDPL VIQEVMLIIS IICLRSPDHA AKAIEAGAGD LAVQAMKRFP
401: VAAQMQRNAC NMIRNIAVRS AENRTILLAN GIEKLIRTAK ANNETCRAAA TDALRDLGLD NYNN

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.