Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69015 | Canola | cytosol | 85.99 | 87.89 |
| CDX75390 | Canola | cytosol | 85.78 | 87.67 |
| Bra011480.1-P | Field mustard | cytosol | 85.34 | 87.22 |
| VIT_03s0063g01020.t01 | Wine grape | cytosol | 64.66 | 65.22 |
| PGSC0003DMT400059061 | Potato | cytosol | 59.7 | 60.09 |
| Solyc11g044870.1.1 | Tomato | cytosol | 59.48 | 59.87 |
| GSMUA_Achr3P06810_001 | Banana | cytosol | 58.41 | 58.15 |
| KRH49769 | Soybean | plastid | 56.47 | 56.22 |
| TraesCS6D01G293000.1 | Wheat | cytosol | 55.17 | 56.02 |
| TraesCS6A01G313600.1 | Wheat | cytosol | 55.17 | 56.02 |
| TraesCS6B01G343700.1 | Wheat | cytosol | 54.53 | 55.36 |
| Os02t0761200-01 | Rice | cytosol | 54.53 | 54.64 |
| KXG31158 | Sorghum | cytosol | 54.09 | 54.57 |
| KRG89234 | Soybean | cytosol, extracellular | 21.34 | 53.51 |
| HORVU6Hr1G077280.1 | Barley | cytosol | 55.17 | 51.61 |
| Zm00001d018144_P003 | Maize | cytosol | 53.23 | 50.0 |
| Zm00001d005332_P001 | Maize | cytosol | 15.95 | 35.24 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:13.2.5.1.3 | EntrezGene:829540 | ProteinID:AEE86298.1 | InterPro:ARM-like | InterPro:ARM-type_fold |
| ArrayExpress:AT4G33945 | EnsemblPlantsGene:AT4G33945 | RefSeq:AT4G33945 | TAIR:AT4G33945 | RefSeq:AT4G33945-TAIR-G | EnsemblPlants:AT4G33945.1 |
| TAIR:AT4G33945.1 | EMBL:AY099835 | InterPro:Armadillo | EMBL:BT026356 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 |
| InterPro:IPR000225 | InterPro:IPR011989 | RefSeq:NP_567944.1 | PO:PO:0000293 | PO:PO:0020030 | PANTHER:PTHR22895 |
| PANTHER:PTHR22895:SF0 | UniProt:Q8L5Z0 | SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI00000A04B6 | SEG:seg |
Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Z0]
Coordinates
chr4:+:16267884..16270925
Molecular Weight (calculated)
49791.7 Da
IEP (calculated)
4.577
GRAVY (calculated)
0.087
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVRTISQEA FDDLVRENVE DLGMDPSEAL EDALYTLKLQ GVDLFGIITC VPGESSVKDN PVIACLDRLK EFDSVSIDGP LRDEVFDEIS SLFKNLNELC
101: SSQESGNAAI ATKHGAVDLT CSICSKIKIS TRSNRVLVPC FKALAVLIRD IQSTERFRNC TGPNIVVDLL NDSSSDSDLL DAGFAVVAAA ATGNEVVKQL
201: FMELKIDELI LQVLNRESKT TIRALYDAIC ALLTPDDFRV VASQVYGYAR TFAKLGIATA LTEALQAGIG SDSLVSASTA LKAIAVNDEI CKSIAESGGI
301: DTLLRCIDDS GEQGNKTAAK TCCSLLSKLA GSDSNKSTIV EKQGLDKLIT LALRFSDDPL VIQEVMLIIS IICLRSPDHA AKAIEAGAGD LAVQAMKRFP
401: VAAQMQRNAC NMIRNIAVRS AENRTILLAN GIEKLIRTAK ANNETCRAAA TDALRDLGLD NYNN
101: SSQESGNAAI ATKHGAVDLT CSICSKIKIS TRSNRVLVPC FKALAVLIRD IQSTERFRNC TGPNIVVDLL NDSSSDSDLL DAGFAVVAAA ATGNEVVKQL
201: FMELKIDELI LQVLNRESKT TIRALYDAIC ALLTPDDFRV VASQVYGYAR TFAKLGIATA LTEALQAGIG SDSLVSASTA LKAIAVNDEI CKSIAESGGI
301: DTLLRCIDDS GEQGNKTAAK TCCSLLSKLA GSDSNKSTIV EKQGLDKLIT LALRFSDDPL VIQEVMLIIS IICLRSPDHA AKAIEAGAGD LAVQAMKRFP
401: VAAQMQRNAC NMIRNIAVRS AENRTILLAN GIEKLIRTAK ANNETCRAAA TDALRDLGLD NYNN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.