CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011480.1-P	Field mustard	cytosol	98.9	98.9
CDX69015	Canola	cytosol	97.14	97.14
AT4G33945.1	Thale cress	cytosol	87.67	85.78
VIT_03s0063g01020.t01	Wine grape	cytosol	65.42	64.57
PGSC0003DMT400059061	Potato	cytosol	61.23	60.3
Solyc11g044870.1.1	Tomato	cytosol	61.01	60.09
GSMUA_Achr3P06810_001	Banana	cytosol	58.81	57.3
KRH49769	Soybean	plastid	58.59	57.08
TraesCS6D01G293000.1	Wheat	cytosol	57.05	56.67
TraesCS6A01G313600.1	Wheat	cytosol	57.05	56.67
TraesCS6B01G343700.1	Wheat	cytosol	56.39	56.02
KXG31158	Sorghum	cytosol	56.17	55.43
Os02t0761200-01	Rice	cytosol	55.51	54.43
KRG89234	Soybean	cytosol, extracellular	21.59	52.97
Zm00001d018144_P003	Maize	cytosol	56.17	51.62
HORVU6Hr1G077280.1	Barley	cytosol	56.39	51.61
Zm00001d005332_P001	Maize	cytosol	17.62	38.1

Protein Annotations

Gene3D:1.25.10.10	MapMan:13.2.5.1.3	UniProt:A0A068F6Y5	ProteinID:AID60112.1	ProteinID:AID60155.1	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	EnsemblPlants:CDX75390	ProteinID:CDX75390	ProteinID:CDX75390.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00121272001	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR22895	PANTHER:PTHR22895:SF0	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0004A88C80	SEG:seg

Description

BnaA01g03120DARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A068F6Y5]

Coordinates

chrLK031804:+:904650..907070

Molecular Weight (calculated)

48600.5 Da

IEP (calculated)

4.682

GRAVY (calculated)

0.091

Length

454 amino acids

Sequence
(BLAST)

001: MATRVISQEA FDDLVKENVE DLGMEPSEAL EDALYTLKLQ GVDLSGIITC VPGESSVKDN PVIACLDRLK ELDDEFDEIS SLLVKLSELC SGQESGNVAI
101: ATKHGAVELT CSICSKIKID SRSNAIVVPC LKALAVLIHD IQSTEAFRNA SGPRIVVDLL RDSGFDSDLL DAGFAVVAAA ATGNEVVKEI FMELKVDELI
201: LKVLNRESKV TIRALYDAIR VLLTPDDNRV VASQVYGYAR TFAKLGIARA LTEALQAGIG SDSLVSASIA LKSIAVNDEI CKSIAESGGI DTLLRCIDDS
301: GEQGNNTAAK TCCSLLSKLA GSDSNKSTIV EKRGLDKLIK LAQRFSDDPL VIQEVMSIIS IICLRSPDHA ASAIEAGAGD LAIQAMKRFP AAAQMQRNAC
401: NMIRNIAVRN AENRKILLAS GIEKLIRNAK ANNEICRASA TDALRDLGLD NYNS

Best Arabidopsis Sequence Match ( AT4G33945.1 )
(BLAST)

001: MGVRTISQEA FDDLVRENVE DLGMDPSEAL EDALYTLKLQ GVDLFGIITC VPGESSVKDN PVIACLDRLK EFDSVSIDGP LRDEVFDEIS SLFKNLNELC
101: SSQESGNAAI ATKHGAVDLT CSICSKIKIS TRSNRVLVPC FKALAVLIRD IQSTERFRNC TGPNIVVDLL NDSSSDSDLL DAGFAVVAAA ATGNEVVKQL
201: FMELKIDELI LQVLNRESKT TIRALYDAIC ALLTPDDFRV VASQVYGYAR TFAKLGIATA LTEALQAGIG SDSLVSASTA LKAIAVNDEI CKSIAESGGI
301: DTLLRCIDDS GEQGNKTAAK TCCSLLSKLA GSDSNKSTIV EKQGLDKLIT LALRFSDDPL VIQEVMLIIS IICLRSPDHA AKAIEAGAGD LAVQAMKRFP
401: VAAQMQRNAC NMIRNIAVRS AENRTILLAN GIEKLIRTAK ANNETCRAAA TDALRDLGLD NYNN

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.