Factsheet for Os02t0761200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0540700-00
Os04t0418500-01
Os05t0439400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33945.1	Os02t0540700-00	AT5G09800.1	21798944
AT4G33945.1	Os04t0418500-01	AT5G09800.1	21798944
AT4G33945.1	Os05t0439400-01	AT5G09800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G343700.1	Wheat	cytosol	82.51	83.59
TraesCS6D01G293000.1	Wheat	cytosol	82.51	83.59
TraesCS6A01G313600.1	Wheat	cytosol	82.29	83.37
KXG31158	Sorghum	cytosol	82.29	82.83
HORVU6Hr1G077280.1	Barley	cytosol	82.29	76.81
Zm00001d018144_P003	Maize	cytosol	80.78	75.71
GSMUA_Achr3P06810_001	Banana	cytosol	61.56	61.16
VIT_03s0063g01020.t01	Wine grape	cytosol	57.88	58.26
PGSC0003DMT400059061	Potato	cytosol	55.51	55.75
Solyc11g044870.1.1	Tomato	cytosol	55.51	55.75
Bra011480.1-P	Field mustard	cytosol	54.43	55.51
CDX69015	Canola	cytosol	54.43	55.51
CDX75390	Canola	cytosol	54.43	55.51
AT4G33945.1	Thale cress	cytosol	54.64	54.53
KRG89234	Soybean	cytosol, extracellular	20.09	50.27
KRH49769	Soybean	plastid	49.89	49.57

Protein Annotations

MapMan:13.2.5.1.3	EntrezGene:4330807	EMBL:AK073828	InterPro:ARM-type_fold	InterPro:Armadillo	ProteinID:BAD17201.1
ProteinID:BAD19413.1	ProteinID:BAF10109.1	ProteinID:BAS81034.1	ProteinID:EAZ24702.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000225	EnsemblPlantsGene:Os02g0761200	EnsemblPlants:Os02t0761200-01	PANTHER:PTHR22895	PANTHER:PTHR22895:SF0
UniProt:Q6Z6H7	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000035AE42	RefSeq:XP_015624909.1	SEG:seg

Description

Armadillo-like helical domain containing protein. (Os02t0761200-01)

Coordinates

chr2:-:32052568..32055886

Molecular Weight (calculated)

49134.9 Da

IEP (calculated)

4.656

GRAVY (calculated)

-0.015

Length

463 amino acids

Sequence
(BLAST)

001: MAIAISQEAF DAMVRENMED LGMDADEALA DAVDALTLQG ADLSGIIKRV PGEAAAAEVS PVMRVLDEVK ASSASDSDSG GRSEEDAERL ASLLDELREL
101: CSGDGLENAA VAARNGGVEA LVALCASAGV KQERLLASGL KALSSLLRDV GSTEKFRQSE GPQVVMGILK GGSESSDILE GGFRVVASAS AGNEVVKECF
201: MVLKVDELIF QVMGEKSNSN VQSLYDAIRV LLTPDDNRVV ASQVYGYSRR FAETGIAAVL VNALREKVAP SSLPSACAAL KAIAVNDEIC RSISENGGID
301: VLLRCIDEAS EQKNKVIAKS CCSLLSKLAG SDANKTTIIE RGGFDKFLKL TSRFSEDPPI IQEVMSMVTI LTLRSPENAA RAMGAGYGTL AIQAMQKFPS
401: SAQTQKQACL MIRNLVVRNP ENRTILLNDG VEKLIRKTKM MHGSCKDAAT SALRDLGVDN YNA

Best Arabidopsis Sequence Match ( AT4G33945.1 )
(BLAST)

001: MGVRTISQEA FDDLVRENVE DLGMDPSEAL EDALYTLKLQ GVDLFGIITC VPGESSVKDN PVIACLDRLK EFDSVSIDGP LRDEVFDEIS SLFKNLNELC
101: SSQESGNAAI ATKHGAVDLT CSICSKIKIS TRSNRVLVPC FKALAVLIRD IQSTERFRNC TGPNIVVDLL NDSSSDSDLL DAGFAVVAAA ATGNEVVKQL
201: FMELKIDELI LQVLNRESKT TIRALYDAIC ALLTPDDFRV VASQVYGYAR TFAKLGIATA LTEALQAGIG SDSLVSASTA LKAIAVNDEI CKSIAESGGI
301: DTLLRCIDDS GEQGNKTAAK TCCSLLSKLA GSDSNKSTIV EKQGLDKLIT LALRFSDDPL VIQEVMLIIS IICLRSPDHA AKAIEAGAGD LAVQAMKRFP
401: VAAQMQRNAC NMIRNIAVRS AENRTILLAN GIEKLIRTAK ANNETCRAAA TDALRDLGLD NYNN

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.