Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001412.1-P | Field mustard | nucleus | 89.97 | 95.68 |
| CDY56601 | Canola | cytosol, golgi, plastid | 91.06 | 91.06 |
| CDY01038 | Canola | plastid | 75.88 | 45.9 |
| CDY08511 | Canola | plastid | 75.61 | 45.37 |
| AT3G11590.1 | Thale cress | plastid | 75.88 | 45.02 |
| KRG96225 | Soybean | nucleus | 55.28 | 31.14 |
| VIT_08s0007g02790.t01 | Wine grape | plastid | 55.01 | 30.85 |
| KRH67971 | Soybean | plastid | 54.47 | 30.45 |
| PGSC0003DMT400072353 | Potato | plastid | 50.41 | 28.4 |
| Solyc10g083190.1.1 | Tomato | plastid | 48.78 | 27.23 |
| Os02t0506100-00 | Rice | plastid | 22.49 | 19.04 |
| CDX70996 | Canola | nucleus | 22.76 | 17.68 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 24.39 | 17.68 |
| CDY67997 | Canola | mitochondrion, plastid | 21.95 | 17.2 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 28.73 | 17.18 |
| CDX88802 | Canola | nucleus | 21.68 | 17.09 |
| Os04t0382800-00 | Rice | nucleus | 26.29 | 16.99 |
| CDX92367 | Canola | mitochondrion, plastid | 21.68 | 16.67 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 25.75 | 16.58 |
| EES11990 | Sorghum | nucleus | 25.2 | 16.37 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 24.93 | 16.25 |
| Zm00001d003996_P001 | Maize | nucleus | 24.93 | 16.17 |
| Zm00001d025208_P002 | Maize | nucleus | 25.47 | 16.04 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 24.12 | 15.98 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 24.39 | 15.9 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 22.76 | 14.51 |
| TraesCS7B01G035800.1 | Wheat | nucleus | 22.49 | 14.36 |
| TraesCS7A01G134600.1 | Wheat | nucleus | 22.49 | 14.34 |
| Zm00001d000402_P001 | Maize | mitochondrion | 19.78 | 13.32 |
| CDX80001 | Canola | nucleus | 11.92 | 13.25 |
| KXG30263 | Sorghum | mitochondrion | 21.41 | 12.7 |
| CDY34403 | Canola | nucleus | 19.78 | 12.7 |
| CDY25566 | Canola | nucleus | 19.51 | 12.44 |
| CDY39728 | Canola | nucleus | 19.78 | 12.25 |
| CDY44461 | Canola | nucleus | 19.24 | 11.77 |
| CDY42023 | Canola | nucleus | 13.28 | 11.72 |
| CDY22812 | Canola | nucleus | 18.97 | 10.61 |
| CDY37111 | Canola | nucleus | 19.51 | 10.6 |
| CDY25414 | Canola | mitochondrion | 18.16 | 10.52 |
| CDY29821 | Canola | mitochondrion | 18.16 | 10.49 |
| CDX80002 | Canola | cytosol | 1.08 | 8.7 |
Protein Annotations
| EnsemblPlants:CDX73866 | EnsemblPlantsGene:GSBRNA2T00111575001 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF7 | ProteinID:CDX73866 |
| ProteinID:CDX73866.1 | SEG:seg | UniParc:UPI0004EE4817 | MapMan:35.2 | : | : |
Description
BnaA03g31810D
Coordinates
chrLK031800:-:294089..295739
Molecular Weight (calculated)
42253.0 Da
IEP (calculated)
8.365
GRAVY (calculated)
-0.852
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGTGSRQRK GSSTAQKLRL GDCNVEAKNH VSNGSFMDVT LTEFVMFSLC CLYHQQIHLR SMNKRLNVVC SMQIETRSRA VTPTRSTVGV KTRLKECSNA
101: LTTSKELLKI INRMWGQEDR PSSSTSLLSA LHSEIERARL QVNQLIHEHN KPDTNDITYL MKRFAEEWKS NEQRVVEAAI ESVAGELEAE RKLRRRSERL
201: NKKLGKELAE TKAALMKAVK VKEEVEKERE MLQLADALRK ERVQMKLSEY MNHHVEEDGE VDDEHEEDDD LHSIELNIDK SYKWPYGECK SLYLQRSISD
301: WVVQSGKLEK SGEGYLDDTQ GYKPNKASSK DHHLLSGPRL SNFRGGSVPE SRLSDAAKGE NQSARRSRW
101: LTTSKELLKI INRMWGQEDR PSSSTSLLSA LHSEIERARL QVNQLIHEHN KPDTNDITYL MKRFAEEWKS NEQRVVEAAI ESVAGELEAE RKLRRRSERL
201: NKKLGKELAE TKAALMKAVK VKEEVEKERE MLQLADALRK ERVQMKLSEY MNHHVEEDGE VDDEHEEDDD LHSIELNIDK SYKWPYGECK SLYLQRSISD
301: WVVQSGKLEK SGEGYLDDTQ GYKPNKASSK DHHLLSGPRL SNFRGGSVPE SRLSDAAKGE NQSARRSRW
001: MERSGTGSRQ RRASSTVQKL RLGDCNVGAR DPINSGSFMD IETRSRVETP TGSTVGVKTR LKDCSNALTT SKELLKIINR MWGQDDRPSS SMSLVSALHS
101: ELERARLQVN QLIHEHKPEN NDISYLMKRF AEEKAVWKSN EQEVVEAAIE SVAGELEVER KLRRRFESLN KKLGKELAET KSALMKAVKE IENEKRARVM
201: VEKVCDELAR DISEDKAEVE ELKRESFKVK EEVEKEREML QLADALREER VQMKLSEAKH QLEEKNAAVD KLRNQLQTYL KAKRCKEKTR EPPQTQLHNE
301: EAGDYLNHHI SFGSYNIEDG EVENGNEEGS GESDLHSIEL NIDNKSYKWP YGEENRGRKS TPRKSLSLQR SISDCVDWVV QSEKLQKSGD GGLDWGRSID
401: VEPKGYIDET QAYKPNKASS KDHHILSGSR LSNFRGGSVS KSRLSDASKG ENQNARKSRW
101: ELERARLQVN QLIHEHKPEN NDISYLMKRF AEEKAVWKSN EQEVVEAAIE SVAGELEVER KLRRRFESLN KKLGKELAET KSALMKAVKE IENEKRARVM
201: VEKVCDELAR DISEDKAEVE ELKRESFKVK EEVEKEREML QLADALREER VQMKLSEAKH QLEEKNAAVD KLRNQLQTYL KAKRCKEKTR EPPQTQLHNE
301: EAGDYLNHHI SFGSYNIEDG EVENGNEEGS GESDLHSIEL NIDNKSYKWP YGEENRGRKS TPRKSLSLQR SISDCVDWVV QSEKLQKSGD GGLDWGRSID
401: VEPKGYIDET QAYKPNKASS KDHHILSGSR LSNFRGGSVS KSRLSDASKG ENQNARKSRW
Arabidopsis Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.