Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01038 | Canola | plastid | 88.59 | 90.33 |
| Bra034827.1-P | Field mustard | plastid | 88.26 | 89.41 |
| CDY08511 | Canola | plastid | 88.26 | 89.27 |
| Bra001412.1-P | Field mustard | nucleus | 44.86 | 80.4 |
| CDY56601 | Canola | cytosol, golgi, plastid | 45.18 | 76.15 |
| CDX73866 | Canola | cytosol | 45.02 | 75.88 |
| VIT_08s0007g02790.t01 | Wine grape | plastid | 62.7 | 59.27 |
| KRG96225 | Soybean | nucleus | 61.41 | 58.32 |
| KRH67971 | Soybean | plastid | 61.25 | 57.73 |
| PGSC0003DMT400072353 | Potato | plastid | 55.79 | 52.98 |
| Solyc10g083190.1.1 | Tomato | plastid | 54.82 | 51.59 |
| AT5G22310.1 | Thale cress | nucleus | 27.65 | 35.76 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 34.08 | 34.36 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 27.65 | 30.02 |
| EES11990 | Sorghum | nucleus | 26.69 | 29.23 |
| Zm00001d025208_P002 | Maize | nucleus | 27.17 | 28.84 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 23.47 | 28.68 |
| Zm00001d003996_P001 | Maize | nucleus | 26.21 | 28.65 |
| Os04t0382800-00 | Rice | nucleus | 26.21 | 28.55 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 25.4 | 28.37 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 25.72 | 28.27 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 25.56 | 28.09 |
| Os02t0506100-00 | Rice | plastid | 19.13 | 27.29 |
| TraesCS7B01G035800.1 | Wheat | nucleus | 24.6 | 26.47 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 24.6 | 26.42 |
| TraesCS7A01G134600.1 | Wheat | nucleus | 24.28 | 26.08 |
| AT2G46250.1 | Thale cress | nucleus | 18.65 | 24.79 |
| KXG30263 | Sorghum | mitochondrion | 23.79 | 23.79 |
| Zm00001d000402_P001 | Maize | mitochondrion | 20.1 | 22.81 |
| AT1G50660.1 | Thale cress | nucleus | 25.24 | 21.66 |
| AT5G41620.1 | Thale cress | nucleus | 19.94 | 19.9 |
| AT3G20350.1 | Thale cress | plastid | 21.22 | 19.61 |
| AT1G64180.1 | Thale cress | nucleus | 18.01 | 18.89 |
Protein Annotations
| MapMan:35.1 | EntrezGene:820332 | ProteinID:AAG51453.1 | ProteinID:AEE75070.1 | ArrayExpress:AT3G11590 | EnsemblPlantsGene:AT3G11590 |
| RefSeq:AT3G11590 | TAIR:AT3G11590 | RefSeq:AT3G11590-TAIR-G | EnsemblPlants:AT3G11590.1 | TAIR:AT3G11590.1 | Unigene:At.17667 |
| EMBL:BT002243 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| RefSeq:NP_566392.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF7 | UniProt:Q9CAW9 | UniParc:UPI00000ABF1C | SEG:seg |
Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
Coordinates
chr3:+:3660298..3663734
Molecular Weight (calculated)
69689.4 Da
IEP (calculated)
9.942
GRAVY (calculated)
-0.891
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.