Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- extracellular 2
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G230700.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 97.44 | 97.44 |
| TraesCS5A01G259000.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 89.74 | 91.3 |
| CDY72370 | Canola | cytosol | 25.64 | 28.3 |
| HORVU2Hr1G051860.1 | Barley | cytosol | 34.19 | 23.81 |
| HORVU6Hr1G046490.1 | Barley | cytosol | 22.22 | 20.63 |
| HORVU6Hr1G008360.2 | Barley | mitochondrion, peroxisome, plasma membrane | 38.46 | 20.0 |
| Solyc06g082640.2.1 | Tomato | cytosol | 35.04 | 18.22 |
| Solyc10g037910.1.1 | Tomato | cytosol, plasma membrane | 35.9 | 17.87 |
| CDY62551 | Canola | cytosol | 35.9 | 15.91 |
| KRH21176 | Soybean | cytosol | 33.33 | 15.0 |
| CDY69647 | Canola | cytosol | 40.17 | 13.82 |
| VIT_10s0003g01480.t01 | Wine grape | cytosol | 44.44 | 13.68 |
| TraesCS1A01G125000.1 | Wheat | cytosol | 47.01 | 13.68 |
| TraesCS3A01G136500.1 | Wheat | cytosol | 43.59 | 13.49 |
| VIT_12s0028g01810.t01 | Wine grape | cytosol | 44.44 | 12.94 |
| CDY64921 | Canola | cytosol | 41.03 | 12.83 |
| CDY66894 | Canola | cytosol | 41.03 | 12.83 |
| CDY70859 | Canola | cytosol | 41.03 | 12.83 |
| CDX78886 | Canola | cytosol | 41.03 | 12.83 |
| Bra013341.1-P | Field mustard | cytosol | 41.03 | 12.83 |
| Bra012581.1-P | Field mustard | cytosol | 41.03 | 12.83 |
| Bra018285.1-P | Field mustard | cytosol | 38.46 | 12.75 |
| CDY34051 | Canola | cytosol | 41.03 | 12.63 |
| Bra020994.1-P | Field mustard | cytosol | 41.03 | 12.63 |
| AT4G18710.1 | Thale cress | cytosol | 41.03 | 12.63 |
| CDX99437 | Canola | cytosol | 41.03 | 12.6 |
| KRH52380 | Soybean | cytosol | 40.17 | 12.37 |
| KRH61707 | Soybean | cytosol | 40.17 | 12.37 |
| PGSC0003DMT400068764 | Potato | cytosol | 40.17 | 12.3 |
| PGSC0003DMT400073091 | Potato | cytosol | 40.17 | 12.3 |
| Solyc02g072300.2.1 | Tomato | cytosol | 40.17 | 12.3 |
| Solyc03g006070.2.1 | Tomato | cytosol | 40.17 | 12.3 |
| KRH70115 | Soybean | cytosol | 35.9 | 12.1 |
| KRH21245 | Soybean | cytosol | 38.46 | 12.03 |
| KRH27067 | Soybean | cytosol | 41.88 | 11.98 |
| KRH11042 | Soybean | cytosol | 38.46 | 11.84 |
| KRH22265 | Soybean | cytosol | 41.88 | 11.75 |
| Bra021685.1-P | Field mustard | cytosol | 41.03 | 11.71 |
| CDX97773 | Canola | cytosol | 41.03 | 11.71 |
| AT1G06390.1 | Thale cress | cytosol | 40.17 | 11.55 |
| KRH42881 | Soybean | cytosol | 37.61 | 11.49 |
| KRH58985 | Soybean | cytosol | 37.61 | 11.49 |
| KRH25797 | Soybean | cytosol | 41.03 | 11.43 |
| AT2G30980.1 | Thale cress | cytosol | 40.17 | 11.41 |
| PGSC0003DMT400052647 | Potato | cytosol | 41.03 | 11.06 |
| Solyc07g055200.2.1 | Tomato | cytosol | 41.03 | 10.98 |
| KRH55721 | Soybean | cytosol | 39.32 | 10.98 |
| TraesCS4A01G361100.1 | Wheat | cytosol | 37.61 | 10.78 |
| TraesCS3A01G164200.1 | Wheat | cytosol | 36.75 | 10.59 |
| TraesCS1A01G407700.5 | Wheat | cytosol | 36.75 | 10.05 |
| TraesCS4A01G345500.1 | Wheat | cytosol | 36.75 | 10.05 |
| TraesCS1A01G077200.1 | Wheat | cytosol | 33.33 | 9.51 |
| TraesCS1A01G189000.1 | Wheat | cytosol, mitochondrion | 34.19 | 8.53 |
| Solyc04g025600.1.1 | Tomato | cytosol | 7.69 | 8.41 |
| TraesCS4A01G049900.1 | Wheat | cytosol | 15.38 | 5.42 |
| CDY10766 | Canola | extracellular, plasma membrane, vacuole | 10.26 | 5.36 |
| TraesCS2A01G263400.1 | Wheat | cytosol, nucleus | 13.68 | 4.68 |
| TraesCS5A01G400900.1 | Wheat | mitochondrion, plastid | 16.24 | 4.61 |
| TraesCS5A01G400100.1 | Wheat | cytosol, mitochondrion | 14.53 | 4.46 |
| CDY52692 | Canola | cytosol, mitochondrion, nucleus | 3.42 | 3.54 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G365100.1 | EnsemblPlantsGene:TraesCS4A01G365100 | PANTHER:PTHR24057 | PANTHER:PTHR24057:SF5 | MapMan:50.2.7 | : |
Description
No Description!
Coordinates
chr4A:-:638240325..638241099
Molecular Weight (calculated)
13725.1 Da
IEP (calculated)
9.486
GRAVY (calculated)
0.180
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFSLKHCFF STASRDEPFL NLVMEYVLKI LYRMLKNYSN AKQGMPLIYV KLYTYQGACV GSYCSWSLPR GCEATKCLVL LFVAITLHTI RQNKATKVYK
101: YTTRSMLYVY VCMDRCY
101: YTTRSMLYVY VCMDRCY
001: MASLPLGPQP HALAPPLQLH DGDALKRRPE LDSDKEMSAA VIEGNDAVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGESVAIKK
101: VLQDRRYKNR ELQLMRPMDH PNVISLKHCF FSTTSRDELF LNLVMEYVPE TLYRVLRHYT SSNQRMPIFY VKLYTYQIFR GLAYIHTVPG VCHRDVKPQN
201: LLVDPLTHQV KLCDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTA SIDIWSAGCV LAELLLGQPL FPGENSVDQL VEIIKVLGTP TREEIRCMNP
301: NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRCTALEACA HPFFNELREP NARLPNGRPL PPLFNFKQEL GGASMELINR LIPEHVRRQM
401: STGLQNS
101: VLQDRRYKNR ELQLMRPMDH PNVISLKHCF FSTTSRDELF LNLVMEYVPE TLYRVLRHYT SSNQRMPIFY VKLYTYQIFR GLAYIHTVPG VCHRDVKPQN
201: LLVDPLTHQV KLCDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTA SIDIWSAGCV LAELLLGQPL FPGENSVDQL VEIIKVLGTP TREEIRCMNP
301: NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRCTALEACA HPFFNELREP NARLPNGRPL PPLFNFKQEL GGASMELINR LIPEHVRRQM
401: STGLQNS
Arabidopsis Description
ASK9SK22 [Source:UniProtKB/TrEMBL;Acc:A0A178WCN5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.