Factsheet for Solyc02g072300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g072300.2.1
Solyc03g006070.2.1
Solyc03g118290.2.1
Solyc12g042070.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18710.1	Solyc02g072300.2.1	AT4G18710.1	18599455
AT4G18710.1	Solyc03g006070.2.1	AT4G18710.1	18599455
AT4G18710.1	Solyc03g118290.2.1	AT5G62000.1	18599455
AT4G18710.1	Solyc12g042070.1.1	AT5G62000.1	18599455

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073091	Potato	cytosol	100.0	100.0
Solyc03g006070.2.1	Tomato	cytosol	94.24	94.24
VIT_10s0003g01480.t01	Wine grape	cytosol	91.1	91.58
CDY69647	Canola	cytosol	80.37	90.29
Bra013341.1-P	Field mustard	cytosol	87.96	89.84
CDX78886	Canola	cytosol	87.96	89.84
AT4G18710.1	Thale cress	cytosol	89.27	89.74
CDY70859	Canola	cytosol	87.7	89.57
CDY34051	Canola	cytosol	89.01	89.47
Bra012581.1-P	Field mustard	cytosol	87.43	89.3
Bra020994.1-P	Field mustard	cytosol	88.74	89.21
CDY64921	Canola	cytosol	87.17	89.04
CDX99437	Canola	cytosol	88.74	88.98
KRH61707	Soybean	cytosol	88.48	88.95
Os01t0205700-01	Rice	cytosol	53.93	88.41
KRH52380	Soybean	cytosol	87.43	87.89
KRH21245	Soybean	cytosol	85.08	86.9
KRH11042	Soybean	cytosol	86.13	86.58
TraesCS3A01G136500.1	Wheat	cytosol	84.56	85.45
Solyc06g082640.2.1	Tomato	cytosol	50.0	84.89
CDY62551	Canola	cytosol	58.64	84.85
TraesCS1A01G125000.1	Wheat	cytosol	85.6	81.34
TraesCS1B01G142300.1	Wheat	cytosol	85.6	81.34
TraesCS1D01G129000.2	Wheat	cytosol	85.6	81.34
Os05t0207500-01	Rice	cytosol	84.56	80.35
EES00093	Sorghum	cytosol	84.29	79.7
Zm00001d008893_P001	Maize	cytosol	83.77	78.82
KRH42881	Soybean	cytosol	78.53	78.33
HORVU3Hr1G026020.3	Barley	mitochondrion	84.56	78.02
Solyc10g037910.1.1	Tomato	cytosol, plasma membrane	47.91	77.87
KRH58985	Soybean	cytosol	78.01	77.81
TraesCS3D01G137200.1	Wheat	cytosol	80.1	76.31
Solyc07g055200.2.1	Tomato	cytosol	86.65	75.74
Zm00001d039407_P001	Maize	cytosol	83.25	74.13
Solyc02g086670.2.1	Tomato	cytosol	76.96	72.77
Solyc12g062870.1.1	Tomato	cytosol	77.49	72.2
Solyc01g101000.2.1	Tomato	cytosol	74.35	69.44
HORVU6Hr1G046490.1	Barley	cytosol	22.51	68.25
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	40.05	68.0
HORVU2Hr1G051860.1	Barley	cytosol	28.01	63.69
Solyc04g025600.1.1	Tomato	cytosol	17.8	63.55
Solyc01g103430.2.1	Tomato	cytosol	70.16	63.51
Solyc01g091620.2.1	Tomato	cytosol, mitochondrion	74.61	60.0
Solyc05g051050.2.1	Tomato	cytosol, mitochondrion	71.99	59.01
TraesCS5A01G259000.1	Wheat	endoplasmic reticulum, extracellular, plastid	13.09	43.48
TraesCS1B01G361800.1	Wheat	endoplasmic reticulum, extracellular, plastid	12.83	42.61
TraesCS5B01G230700.1	Wheat	endoplasmic reticulum, extracellular, plastid	12.57	41.03
TraesCS4A01G365100.1	Wheat	endoplasmic reticulum, extracellular, plastid	12.3	40.17
Solyc03g044140.2.1	Tomato	cytosol, nucleus	27.23	31.23
Solyc02g092640.2.1	Tomato	cytosol, nucleus	26.44	30.33
Solyc02g064700.2.1	Tomato	plastid	26.44	23.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	UniProt:K4B8K4	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF12	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc02g072300.2	EnsemblPlants:Solyc02g072300.2.1
UniParc:UPI00027675A1	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:41586883..41593725

Molecular Weight (calculated)

43316.7 Da

IEP (calculated)

8.111

GRAVY (calculated)

-0.203

Length

382 amino acids

Sequence
(BLAST)

001: MADDKEMSAP VMDGNDAVTG HIISTTIGGK NGEPKQTVSY MAERVVGTGS FGIVFQAKCL ENGETVAIKK VLQDRRYKNR ELQLMRTMDH TNVVCLKHCF
101: YSTTSTNELF LNLVMEYVPE TMYRVLKHYS NMNQRMPLIY VKLYTYQVFR GLAYMHTVAG VCHRDLKPQN VLVDPLTHQV KICDFGSAKV LVKGEANISY
201: ICSRFYRAPE LIFGATEYTT SIDIWSAGCV LAELLLGQPL FPGENAVDQL VEIIKVLGTP TREEIRCMNP NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL
301: ASRLLQYSPS LRCTALEACA HPFFDELREP NARLPNGRPL PPLFNFKQEL SGASPDLVNR LIPDHIKRQM GLHLFASHGD MT

Best Arabidopsis Sequence Match ( AT4G18710.1 )
(BLAST)

001: MADDKEMPAA VVDGHDQVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGETVAIKK VLQDRRYKNR ELQLMRVMDH PNVVCLKHCF
101: FSTTSKDELF LNLVMEYVPE SLYRVLKHYS SANQRMPLVY VKLYMYQIFR GLAYIHNVAG VCHRDLKPQN LLVDPLTHQV KICDFGSAKQ LVKGEANISY
201: ICSRFYRAPE LIFGATEYTT SIDIWSAGCV LAELLLGQPL FPGENAVDQL VEIIKVLGTP TREEIRCMNP HYTDFRFPQI KAHPWHKIFH KRMPPEAIDF
301: ASRLLQYSPS LRCTALEACA HPFFDELREP NARLPNGRPF PPLFNFKQEV AGSSPELVNK LIPDHIKRQL GLSFLNQSGT

Arabidopsis Description

ASK7Shaggy-related protein kinase eta [Source:UniProtKB/Swiss-Prot;Acc:Q39011]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.