CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH08190
KRH18664
KRH28715
KRH31638
KRH69070
KRH69884
KRH76747

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06390.1	KRH08190	AT3G50910.1	21798944
AT1G06390.1	KRH28715	AT3G50910.1	21798944
AT1G06390.1	KRH69884	AT3G50910.1	21798944
AT1G06390.1	KRH76747	AT3G50910.1	21798944
AT2G30980.1	KRG89812	AT2G41090.1	17360592
AT2G30980.1	KRG94975	AT2G41090.1	17360592
AT2G30980.1	KRH18664	AT2G41090.1	17360592
AT2G30980.1	KRG89812	AT2G41100.1	17360592
AT2G30980.1	KRG94975	AT2G41100.1	17360592
AT2G30980.1	KRH18664	AT2G41100.1	17360592
AT2G30980.1	KRH31638	AT4G14640.1	17360592
AT2G30980.1	KRH69070	AT4G14640.1	17360592
AT2G30980.1	KRG89812	AT5G21274.1	17360592
AT2G30980.1	KRG94975	AT5G21274.1	17360592
AT2G30980.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25797	Soybean	cytosol	97.61	97.38
CDY66894	Canola	cytosol	81.38	91.18
KRH61707	Soybean	cytosol	80.19	88.42
Os01t0205700-01	Rice	cytosol	48.93	87.98
KRH21245	Soybean	cytosol	78.52	87.97
KRH52380	Soybean	cytosol	79.47	87.63
Bra021685.1-P	Field mustard	cytosol	85.44	87.32
CDX97773	Canola	cytosol	85.44	87.32
KRH11042	Soybean	cytosol	79.0	87.11
AT1G06390.1	Thale cress	cytosol	84.49	86.98
AT2G30980.1	Thale cress	cytosol	84.73	86.17
TraesCS3A01G136500.1	Wheat	cytosol	76.13	84.39
Bra018285.1-P	Field mustard	cytosol	69.93	83.0
Os05t0207500-01	Rice	cytosol	78.52	81.84
TraesCS1D01G129000.2	Wheat	cytosol	78.28	81.59
TraesCS1B01G142300.1	Wheat	cytosol	78.28	81.59
TraesCS1A01G125000.1	Wheat	cytosol	78.04	81.34
CDY10766	Canola	extracellular, plasma membrane, vacuole	43.44	81.25
PGSC0003DMT400052647	Potato	cytosol	84.01	81.11
Solyc07g055200.2.1	Tomato	cytosol	84.01	80.55
EES00093	Sorghum	cytosol	77.57	80.45
KRH27067	Soybean	cytosol	78.52	80.44
KRH22265	Soybean	cytosol	79.71	80.1
Zm00001d008893_P001	Maize	cytosol	77.09	79.56
HORVU3Hr1G026020.3	Barley	mitochondrion	76.37	77.29
KRH42881	Soybean	cytosol	70.41	77.02
TraesCS3D01G137200.1	Wheat	cytosol	73.51	76.81
KRH58985	Soybean	cytosol	70.17	76.76
Zm00001d039407_P001	Maize	cytosol	77.09	75.29
KRG96686	Soybean	cytosol	71.84	74.14
KRH68409	Soybean	cytosol	71.84	74.14
KRH33767	Soybean	cytosol	71.84	73.41
KRH31752	Soybean	cytosol	71.36	73.11
KRG90477	Soybean	cytosol	71.84	70.66
HORVU6Hr1G046490.1	Barley	cytosol	20.76	69.05
KRH69166	Soybean	cytosol	72.31	67.18
KRH26299	Soybean	cytosol	66.83	66.67
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	35.56	66.22
KRH06055	Soybean	cytosol	66.35	66.19
KRH21176	Soybean	cytosol	39.38	63.46
KRH40543	Soybean	mitochondrion	68.97	62.83
KRH48234	Soybean	cytosol, mitochondrion	70.41	62.77
HORVU2Hr1G051860.1	Barley	cytosol	25.06	62.5
KRH65140	Soybean	mitochondrion	68.97	61.49
KRH00638	Soybean	mitochondrion	68.5	61.46
Solyc04g025600.1.1	Tomato	cytosol	15.27	59.81
KRH62838	Soybean	cytosol, mitochondrion	11.69	59.76
KRH70115	Soybean	cytosol	47.26	57.06
KRH75231	Soybean	cytosol	12.41	52.0
TraesCS5A01G259000.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.69	42.61
KRH58078	Soybean	cytosol	1.91	42.11
TraesCS1B01G361800.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.46	41.74
TraesCS5B01G230700.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.22	40.17
KRH12527	Soybean	cytosol, endoplasmic reticulum, plasma membrane	21.72	40.09
TraesCS4A01G365100.1	Wheat	endoplasmic reticulum, extracellular, plastid	10.98	39.32
KRH32741	Soybean	mitochondrion	18.62	34.36
KRH77093	Soybean	nucleus	24.11	30.33
KRH28388	Soybean	cytosol	24.11	30.33
KRH04448	Soybean	nucleus	23.39	28.24
KRH04471	Soybean	nucleus	24.58	25.88
KRH58068	Soybean	mitochondrion	24.82	25.3
KRH58076	Soybean	endoplasmic reticulum	22.91	24.49

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100802451	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	EMBL:ACUP02004050
EnsemblPlantsGene:GLYMA_06G275800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1KEL6	InterPro:IPR000719
EnsemblPlants:KRH55721	ProteinID:KRH55721	ProteinID:KRH55721.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF12	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233A175	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:46677430..46682577

Molecular Weight (calculated)

47494.6 Da

IEP (calculated)

8.410

GRAVY (calculated)

-0.289

Length

419 amino acids

Sequence
(BLAST)

001: MASLPLGHHH HHQPAAATIH PSQPPQCQPQ PEVPRRSSDM ETDKDMSATV IEGNDAVTGH IISTTIGGKN GEPKQTISYM AERVVGTGSF GVVFQAKCLE
101: TGEAVAIKKV LQDRRYKNRE LQLMRLMDHP NVISLKHCFF STTSKDELFL NLVMEYVPES MYRVIKHYTT MNQRMPLIYV KLYTYQIFRG LAYIHTALRV
201: CHRDVKPQNL LVHPLTHQVK LCDFGSAKVL VKGESNISYI CSRYYRAPEL IFGATEYTPS IDIWSAGCVL AELLLGQPLF PGENQVDQLV EIIKVLGTPT
301: REEIRCMNPN YTDFRFPQIK AHPWHKVFHK RMPPEAIDLA SRLLQYSPSL RCTALEACAH PFFDELREPN ARLPNGHPLP PLFNFKQELA GASPELINRL
401: IPEHIRRQMG LSFPHSAGS

Best Arabidopsis Sequence Match ( AT2G30980.1 )
(BLAST)

001: MTSIPLGPPQ PPSLAPQPPH LHGGDSLKRR PDIDNDKEMS AAVIEGNDAV TGHIISTTIG GKNGEPKQTI SYMAERVVGT GSFGIVFQAK CLETGESVAI
101: KKVLQDRRYK NRELQLMRLM DHPNVVSLKH CFFSTTTRDE LFLNLVMEYV PETLYRVLKH YTSSNQRMPI FYVKLYTYQI FRGLAYIHTA PGVCHRDVKP
201: QNLLVDPLTH QCKLCDFGSA KVLVKGEANI SYICSRYYRA PELIFGATEY TSSIDIWSAG CVLAELLLGQ PLFPGENSVD QLVEIIKVLG TPTREEIRCM
301: NPNYTDFRFP QIKAHPWHKV FHKRMPPEAI DLASRLLQYS PSLRCTALEA CAHPFFNELR EPNARLPNGR PLPPLFNFKQ ELSGASPELI NRLIPEHVRR
401: QMNGGFPFQA GP

Arabidopsis Description

ASK6SKdZeta [Source:UniProtKB/TrEMBL;Acc:A0A178W1X9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.