Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_10s0003g01480.t01 | Wine grape | cytosol | 84.83 | 89.74 |
Os01t0205700-01 | Rice | cytosol | 50.25 | 86.7 |
TraesCS3A01G136500.1 | Wheat | cytosol | 80.35 | 85.45 |
AT1G06390.1 | Thale cress | cytosol | 85.57 | 84.52 |
AT2G30980.1 | Thale cress | cytosol | 86.32 | 84.22 |
Bra021685.1-P | Field mustard | cytosol | 85.07 | 83.41 |
Os05t0207500-01 | Rice | cytosol | 81.84 | 81.84 |
TraesCS1A01G125000.1 | Wheat | cytosol | 81.59 | 81.59 |
TraesCS1B01G142300.1 | Wheat | cytosol | 81.59 | 81.59 |
TraesCS1D01G129000.2 | Wheat | cytosol | 81.59 | 81.59 |
EES00093 | Sorghum | cytosol | 80.6 | 80.2 |
Bra018285.1-P | Field mustard | cytosol | 70.15 | 79.89 |
Zm00001d008893_P001 | Maize | cytosol | 80.6 | 79.8 |
PGSC0003DMT400052647 | Potato | cytosol | 85.82 | 79.49 |
Solyc06g082640.2.1 | Tomato | cytosol | 44.28 | 79.11 |
VIT_15s0045g00420.t01 | Wine grape | cytosol | 8.21 | 78.57 |
HORVU3Hr1G026020.3 | Barley | mitochondrion | 80.85 | 78.5 |
TraesCS3D01G137200.1 | Wheat | cytosol | 77.11 | 77.31 |
VIT_14s0060g00600.t01 | Wine grape | cytosol | 71.64 | 75.59 |
VIT_07s0005g02100.t01 | Wine grape | cytosol | 71.64 | 75.59 |
Zm00001d039407_P001 | Maize | cytosol | 79.6 | 74.59 |
VIT_14s0066g01050.t01 | Wine grape | cytosol | 75.37 | 73.54 |
HORVU6Hr1G046490.1 | Barley | cytosol | 22.64 | 72.22 |
Solyc10g037910.1.1 | Tomato | cytosol, plasma membrane | 41.79 | 71.49 |
CDY72370 | Canola | cytosol | 18.66 | 70.75 |
HORVU6Hr1G008360.2 | Barley | mitochondrion, peroxisome, plasma membrane | 39.3 | 70.22 |
HORVU2Hr1G051860.1 | Barley | cytosol | 27.61 | 66.07 |
KRH21176 | Soybean | cytosol | 41.29 | 63.85 |
VIT_12s0035g01060.t01 | Wine grape | cytosol | 66.67 | 63.51 |
VIT_15s0048g02010.t01 | Wine grape | cytosol, mitochondrion | 69.15 | 59.4 |
KRH70115 | Soybean | cytosol | 49.75 | 57.64 |
TraesCS5A01G259000.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 13.68 | 47.83 |
TraesCS1B01G361800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 13.43 | 46.96 |
TraesCS5B01G230700.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 13.18 | 45.3 |
TraesCS4A01G365100.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 12.94 | 44.44 |
VIT_18s0001g09320.t01 | Wine grape | cytosol | 25.37 | 30.63 |
VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 26.12 | 25.93 |
VIT_07s0129g00270.t01 | Wine grape | mitochondrion | 27.11 | 25.71 |
Protein Annotations
Gene3D:1.10.510.10 | EntrezGene:100248790 | wikigene:100248790 | MapMan:11.3.2.3 | MapMan:18.4.3.4 | Gene3D:3.30.200.20 |
ProteinID:CCB47392 | ProteinID:CCB47392.1 | UniProt:F6H523 | EMBL:FN595235 | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | EntrezGene:LOC100248790 | wikigene:LOC100248790 | PFAM:PF00069 |
ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24057 | PANTHER:PTHR24057:SF12 | InterPro:Prot_kinase_dom |
InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0002109570 | ArrayExpress:VIT_12s0028g01810 |
EnsemblPlantsGene:VIT_12s0028g01810 | EnsemblPlants:VIT_12s0028g01810.t01 | RefSeq:XP_002281788 | RefSeq:XP_002281788.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr12:+:2438998..2448420
Molecular Weight (calculated)
45656.4 Da
IEP (calculated)
8.835
GRAVY (calculated)
-0.287
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLPLGPQT HHHHHHLPPE HDPLKPPFRR PDHLDSDKEM SAAVIEGNDP VTGHIISTTI GGKNGEPKQT ISYMAERIVG TGSFGIVFQA KCLETGETVA
101: IKKVLQDRRY KNRELQLLRL MDHPNVVTLK HCFFSTTSRD ELFLNLVMEY VPETMYRVLK HYSNANQRMP LIYVKLYTYQ IFRGLAYIHT VPGVCHRDVK
201: PQNVLVDPLT HQVKLCDFGS AKVLVKGEAN ISYICSRYYR APELIFGATE YTTSIDIWSA GCVFAELLLG QPLFPGESAV DQLVEIIKVL GTPTREEIRC
301: MNPNYTDFRF PQIKAHPWHK VFHKRMPPEA LDLASRLLQY SPSLRCTALR EPNARLPNGR PLPPLFNFKQ ELAAASPELL HRLIPEHVRR QVGLSFPHPA
401: GT
101: IKKVLQDRRY KNRELQLLRL MDHPNVVTLK HCFFSTTSRD ELFLNLVMEY VPETMYRVLK HYSNANQRMP LIYVKLYTYQ IFRGLAYIHT VPGVCHRDVK
201: PQNVLVDPLT HQVKLCDFGS AKVLVKGEAN ISYICSRYYR APELIFGATE YTTSIDIWSA GCVFAELLLG QPLFPGESAV DQLVEIIKVL GTPTREEIRC
301: MNPNYTDFRF PQIKAHPWHK VFHKRMPPEA LDLASRLLQY SPSLRCTALR EPNARLPNGR PLPPLFNFKQ ELAAASPELL HRLIPEHVRR QVGLSFPHPA
401: GT
001: MTSIPLGPPQ PPSLAPQPPH LHGGDSLKRR PDIDNDKEMS AAVIEGNDAV TGHIISTTIG GKNGEPKQTI SYMAERVVGT GSFGIVFQAK CLETGESVAI
101: KKVLQDRRYK NRELQLMRLM DHPNVVSLKH CFFSTTTRDE LFLNLVMEYV PETLYRVLKH YTSSNQRMPI FYVKLYTYQI FRGLAYIHTA PGVCHRDVKP
201: QNLLVDPLTH QCKLCDFGSA KVLVKGEANI SYICSRYYRA PELIFGATEY TSSIDIWSAG CVLAELLLGQ PLFPGENSVD QLVEIIKVLG TPTREEIRCM
301: NPNYTDFRFP QIKAHPWHKV FHKRMPPEAI DLASRLLQYS PSLRCTALEA CAHPFFNELR EPNARLPNGR PLPPLFNFKQ ELSGASPELI NRLIPEHVRR
401: QMNGGFPFQA GP
101: KKVLQDRRYK NRELQLMRLM DHPNVVSLKH CFFSTTTRDE LFLNLVMEYV PETLYRVLKH YTSSNQRMPI FYVKLYTYQI FRGLAYIHTA PGVCHRDVKP
201: QNLLVDPLTH QCKLCDFGSA KVLVKGEANI SYICSRYYRA PELIFGATEY TSSIDIWSAG CVLAELLLGQ PLFPGENSVD QLVEIIKVLG TPTREEIRCM
301: NPNYTDFRFP QIKAHPWHKV FHKRMPPEAI DLASRLLQYS PSLRCTALEA CAHPFFNELR EPNARLPNGR PLPPLFNFKQ ELSGASPELI NRLIPEHVRR
401: QMNGGFPFQA GP
Arabidopsis Description
ASK6SKdZeta [Source:UniProtKB/TrEMBL;Acc:A0A178W1X9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.