Factsheet for TraesCS5A01G400900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G313300.1
TraesCS2B01G332100.1
TraesCS2D01G311800.1
TraesCS3A01G150300.2
TraesCS3B01G177300.1
TraesCS3D01G158200.1
TraesCS4A01G315700.3
TraesCS5A01G400900.1
TraesCS5B01G405700.1
TraesCS5B01G563800.2
TraesCS5D01G411100.1
TraesCS5D01G551200.1
TraesCS6A01G198600.1
TraesCS6B01G230000.1
TraesCS6D01G184500.2
TraesCS7A01G297900.2
TraesCS7B01G184800.1
TraesCS7D01G292000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23070.1	TraesCS7A01G297900.2	AT1G64860.1	22111690
AT2G23070.1	TraesCS7B01G184800.1	AT1G64860.1	22111690
AT2G23070.1	TraesCS7D01G292000.1	AT1G64860.1	22111690
AT2G23070.1	TraesCS5A01G400900.1	AT2G23070.1	22111690
AT2G23070.1	TraesCS5B01G405700.1	AT2G23070.1	22111690
AT2G23070.1	TraesCS5D01G411100.1	AT2G23070.1	22111690
AT2G23070.1	TraesCS4A01G315700.3	AT2G36990.1	22111690
AT2G23070.1	TraesCS5B01G563800.2	AT2G36990.1	22111690
AT2G23070.1	TraesCS5D01G551200.1	AT2G36990.1	22111690
AT2G23070.1	TraesCS2A01G313300.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS2B01G332100.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS2D01G311800.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS6A01G198600.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS6B01G230000.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS6D01G184500.2	AT3G14180.1	21798944
AT2G23070.1	TraesCS3A01G150300.2	AT5G58720.1	21798944
AT2G23070.1	TraesCS3B01G177300.1	AT5G58720.1	21798944
AT2G23070.1	TraesCS3D01G158200.1	AT5G58720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G411100.1	Wheat	mitochondrion	98.3	98.06
TraesCS5B01G405700.1	Wheat	mitochondrion, plastid	98.3	98.06
HORVU4Hr1G030100.1	Barley	cytosol	19.17	85.87
KXG37490	Sorghum	mitochondrion	81.8	82.0
Os03t0763000-01	Rice	plastid	80.58	81.37
Zm00001d034137_P001	Maize	plastid	75.73	79.59
KRH04448	Soybean	nucleus	63.11	74.93
TraesCS2A01G263400.1	Wheat	cytosol, nucleus	61.89	74.56
TraesCS4A01G049900.1	Wheat	cytosol	58.98	73.19
CDX76880	Canola	cytosol, mitochondrion	61.41	72.91
TraesCS5A01G400100.1	Wheat	cytosol, mitochondrion	63.59	68.77
KRH58076	Soybean	endoplasmic reticulum	61.16	64.29
GSMUA_Achr6P34710_001	Banana	golgi, plasma membrane, vacuole	62.86	64.27
Bra032182.1-P	Field mustard	plastid	62.38	64.09
CDY38928	Canola	plastid	62.38	64.09
VIT_07s0129g00270.t01	Wine grape	mitochondrion	65.53	63.68
KRH58078	Soybean	cytosol	2.91	63.16
Bra039942.1-P	Field mustard	plastid	64.08	62.86
Solyc02g064700.2.1	Tomato	plastid	65.05	62.76
CDY49445	Canola	plastid	64.08	62.71
CDX89544	Canola	plastid	63.11	62.35
AT2G23070.1	Thale cress	plastid	65.05	62.04
Zm00001d032025_P001	Maize	mitochondrion	29.13	60.61
GSMUA_Achr9P09590_001	Banana	mitochondrion, plastid	60.68	57.21
TraesCS3A01G164200.1	Wheat	cytosol	26.46	26.85
TraesCS3A01G136500.1	Wheat	cytosol	24.27	26.45
TraesCS1A01G125000.1	Wheat	cytosol	25.0	25.62
TraesCS4A01G345500.1	Wheat	cytosol	25.24	24.3
TraesCS1A01G407700.5	Wheat	cytosol	25.24	24.3
TraesCS4A01G361100.1	Wheat	cytosol	24.03	24.26
TraesCS1A01G077200.1	Wheat	cytosol	24.03	24.15
TraesCS1A01G189000.1	Wheat	cytosol, mitochondrion	25.73	22.6
TraesCS4A01G365100.1	Wheat	endoplasmic reticulum, extracellular, plastid	4.61	16.24
TraesCS5A01G259000.1	Wheat	endoplasmic reticulum, extracellular, plastid	4.37	15.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0010019	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0040007	GO:GO:0040008	GO:GO:2000028	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054	PANTHER:PTHR24054:SF33
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5A01G400900
EnsemblPlants:TraesCS5A01G400900.1	TIGR:cd14132	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:+:593468019..593474214

Molecular Weight (calculated)

47951.6 Da

IEP (calculated)

9.407

GRAVY (calculated)

-0.546

Length

412 amino acids

Sequence
(BLAST)

001: MAWCALRSRL HPLSPSSAAA AAATPHRLLL CLLSTAAPRH SHGHHHRRRH SPTAYAAAAA ESPRPMPPIG RATRHPAGAT PIARVYADAN SQRPKEYWDY
101: EALDIEWGEQ DGYEVLRKVG KGKYSEVFEG LRTRSEERCV IKILKPVRKK KIKREIKILQ NLYGGPNIIK LLDVVRDDDS KTPSLIFEYV NNTDFRVLYP
201: TLSDYDIRYY IFELLKALDF SHSRGIMHRD VKPHNIMIDH EKRQLRLIDW GLAEFYHPRM EYNVRVASRC YKGPELLVDL LDYDYSLDLW SLGCMFAAMI
301: FRVDPFFHGQ DNYQQLVKIT KVLGTEDFHR YLEKYGLRLD PQLEMLVGRH RKKPWEKFVD SGNRHLVSPE AIDFLDKLLR YDHQERLTAK EAMAHPYFNP
401: VRGSESTREN VQ

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.