Factsheet for TraesCS5D01G411100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G313300.1
TraesCS2B01G332100.1
TraesCS2D01G311800.1
TraesCS3A01G150300.2
TraesCS3B01G177300.1
TraesCS3D01G158200.1
TraesCS4A01G315700.3
TraesCS5A01G400900.1
TraesCS5B01G405700.1
TraesCS5B01G563800.2
TraesCS5D01G411100.1
TraesCS5D01G551200.1
TraesCS6A01G198600.1
TraesCS6B01G230000.1
TraesCS6D01G184500.2
TraesCS7A01G297900.2
TraesCS7B01G184800.1
TraesCS7D01G292000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23070.1	TraesCS7A01G297900.2	AT1G64860.1	22111690
AT2G23070.1	TraesCS7B01G184800.1	AT1G64860.1	22111690
AT2G23070.1	TraesCS7D01G292000.1	AT1G64860.1	22111690
AT2G23070.1	TraesCS5A01G400900.1	AT2G23070.1	22111690
AT2G23070.1	TraesCS5B01G405700.1	AT2G23070.1	22111690
AT2G23070.1	TraesCS5D01G411100.1	AT2G23070.1	22111690
AT2G23070.1	TraesCS4A01G315700.3	AT2G36990.1	22111690
AT2G23070.1	TraesCS5B01G563800.2	AT2G36990.1	22111690
AT2G23070.1	TraesCS5D01G551200.1	AT2G36990.1	22111690
AT2G23070.1	TraesCS2A01G313300.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS2B01G332100.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS2D01G311800.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS6A01G198600.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS6B01G230000.1	AT3G14180.1	21798944
AT2G23070.1	TraesCS6D01G184500.2	AT3G14180.1	21798944
AT2G23070.1	TraesCS3A01G150300.2	AT5G58720.1	21798944
AT2G23070.1	TraesCS3B01G177300.1	AT5G58720.1	21798944
AT2G23070.1	TraesCS3D01G158200.1	AT5G58720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G405700.1	Wheat	mitochondrion, plastid	98.31	98.31
TraesCS5A01G400900.1	Wheat	mitochondrion, plastid	98.06	98.3
HORVU4Hr1G030100.1	Barley	cytosol	19.13	85.87
KXG37490	Sorghum	mitochondrion	81.36	81.75
Os03t0763000-01	Rice	plastid	80.15	81.13
Zm00001d034137_P001	Maize	plastid	75.3	79.34
TraesCS2D01G260500.1	Wheat	cytosol	61.5	76.28
KRH04448	Soybean	nucleus	62.47	74.35
TraesCS4D01G254600.1	Wheat	cytosol	59.08	73.49
CDX76880	Canola	cytosol, mitochondrion	61.02	72.62
TraesCS5D01G410000.1	Wheat	plastid	63.2	68.5
KRH58076	Soybean	endoplasmic reticulum	60.77	64.03
GSMUA_Achr6P34710_001	Banana	golgi, plasma membrane, vacuole	62.47	64.02
Bra032182.1-P	Field mustard	plastid	61.74	63.59
CDY38928	Canola	plastid	61.74	63.59
VIT_07s0129g00270.t01	Wine grape	mitochondrion	65.13	63.44
Bra039942.1-P	Field mustard	plastid	63.68	62.62
Solyc02g064700.2.1	Tomato	plastid	64.65	62.53
CDY49445	Canola	plastid	63.68	62.47
CDX89544	Canola	plastid	62.47	61.87
AT2G23070.1	Thale cress	plastid	64.65	61.81
Zm00001d032025_P001	Maize	mitochondrion	28.57	59.6
KRH58078	Soybean	cytosol	2.66	57.89
GSMUA_Achr9P09590_001	Banana	mitochondrion, plastid	60.29	56.98
TraesCS3D01G177600.2	Wheat	cytosol	26.39	26.85
TraesCS1D01G129000.2	Wheat	cytosol	25.18	25.87
TraesCS3D01G137200.1	Wheat	cytosol	24.46	25.19
TraesCS5D01G512300.2	Wheat	cytosol	24.46	24.51
TraesCS5D01G528400.1	Wheat	cytosol	24.94	24.18
TraesCS1D01G079300.1	Wheat	cytosol	23.97	24.15
TraesCS1D01G187400.1	Wheat	cytosol, mitochondrion	25.67	22.55

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0010019	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0040007	GO:GO:0040008	GO:GO:2000028	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054	PANTHER:PTHR24054:SF33
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5D01G411100
EnsemblPlants:TraesCS5D01G411100.1	TIGR:cd14132	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:474213232..474218627

Molecular Weight (calculated)

47964.6 Da

IEP (calculated)

9.198

GRAVY (calculated)

-0.523

Length

413 amino acids

Sequence
(BLAST)

001: MAWCALRSRL LPLSPSSSAA AAAATPHRLL LCLLSTAAPR HSHGHHHRRR HSPAAYAAAA EESPRPMPPI GRATRHPAGA TPIARFYADA NSQRPKEYWD
101: YEALDIEWGE QDGYEVLRKV GKGKYSEVFE GLRTGSEERC VIKILKPVRK KKIKREIKIL QNLYGGPNII KLLDVVRDDD SKTPSLIFEY VNNTDFRVLY
201: PTLSDYDIRY YIFELLKALD FSHSRGIMHR DVKPHNIMID HEKRQLRLID WGLAEFYHPR MEYNVRVASR CYKGPELLVD LLDYDYSLDL WSLGCMFAAM
301: IFRVDPFFHG QDNYQQLVKI TKVLGTEDFH RYLEKYGLRL DPQLEMLVGR HRKKPWEKFV DSGNRHLVSP EAIDFLDKLL RYDHQERLTA KEAMAHPYFG
401: PVRSSESTRE NVQ

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.