Factsheet for Zm00001d032025_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003549_P001
Zm00001d010753_P001
Zm00001d012810_P003
Zm00001d016876_P001
Zm00001d017254_P002
Zm00001d024507_P001
Zm00001d025514_P001
Zm00001d032025_P001
Zm00001d034137_P001
Zm00001d039321_P008
Zm00001d042917_P001
Zm00001d049494_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23070.1	Zm00001d024507_P001	AT1G64860.1	22111690
AT2G23070.1	Zm00001d049494_P001	AT1G64860.1	22111690
AT2G23070.1	Zm00001d032025_P001	AT2G23070.1	22111690
AT2G23070.1	Zm00001d034137_P001	AT2G23070.1	22111690
AT2G23070.1	Zm00001d012810_P003	AT2G36990.1	22111690
AT2G23070.1	Zm00001d003549_P001	AT3G14180.1	21798944
AT2G23070.1	Zm00001d010753_P001	AT3G14180.1	21798944
AT2G23070.1	Zm00001d016876_P001	AT3G14180.1	21798944
AT2G23070.1	Zm00001d025514_P001	AT3G14180.1	21798944
AT2G23070.1	Zm00001d042917_P001	AT3G14180.1	21798944
AT2G23070.1	Zm00001d017254_P002	AT5G58720.1	21798944
AT2G23070.1	Zm00001d039321_P008	AT5G58720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007951_P001	Maize	cytosol, nucleus	56.06	33.43
CDX76880	Canola	cytosol, mitochondrion	58.59	33.43
KRH04448	Soybean	nucleus	58.59	33.43
KXG37490	Sorghum	mitochondrion	66.67	32.12
Os03t0763000-01	Rice	plastid	63.13	30.64
Zm00001d034137_P001	Maize	plastid	58.59	29.59
HORVU4Hr1G030100.1	Barley	cytosol	13.64	29.35
KRH58076	Soybean	endoplasmic reticulum	58.08	29.34
Zm00001d018669_P004	Maize	cytosol	55.56	29.26
TraesCS5A01G400900.1	Wheat	mitochondrion, plastid	60.61	29.13
Bra032182.1-P	Field mustard	plastid	58.59	28.93
CDY38928	Canola	plastid	58.59	28.93
TraesCS5B01G405700.1	Wheat	mitochondrion, plastid	60.1	28.81
GSMUA_Achr6P34710_001	Banana	golgi, plasma membrane, vacuole	58.59	28.78
Zm00001d013217_P001	Maize	cytosol	55.56	28.72
TraesCS5D01G411100.1	Wheat	mitochondrion	59.6	28.57
Zm00001d034125_P002	Maize	mitochondrion, plastid	55.56	28.57
Bra039942.1-P	Field mustard	plastid	60.61	28.57
CDY49445	Canola	plastid	60.61	28.5
CDX89544	Canola	plastid	59.6	28.3
VIT_07s0129g00270.t01	Wine grape	mitochondrion	59.09	27.59
HORVU5Hr1G097400.2	Barley	cytosol, mitochondrion, nucleus, plastid	59.6	27.57
AT2G23070.1	Thale cress	plastid	60.1	27.55
Solyc02g064700.2.1	Tomato	plastid	58.08	26.93
GSMUA_Achr9P09590_001	Banana	mitochondrion, plastid	51.01	23.11
Zm00001d040263_P003	Maize	cytosol	18.18	8.82
Zm00001d008893_P001	Maize	cytosol	17.68	8.62
Zm00001d008357_P002	Maize	cytosol	18.18	8.53
Zm00001d016188_P002	Maize	cytosol	17.68	8.5
Zm00001d009055_P001	Maize	cytosol	16.67	8.13
Zm00001d053548_P001	Maize	cytosol	17.17	8.04
Zm00001d039730_P001	Maize	cytosol	12.63	7.84
Zm00001d037010_P003	Maize	cytosol	15.66	7.69
Zm00001d039407_P001	Maize	cytosol	16.67	7.69
Zm00001d048564_P003	Maize	cytosol, mitochondrion	18.18	7.66
Zm00001d024729_P001	Maize	plastid	15.66	7.56
Zm00001d029664_P001	Maize	cytosol, mitochondrion	17.17	7.19
KRH58078	Soybean	cytosol	0.51	5.26
Zm00001d053206_P001	Maize	cytosol	5.56	3.17
Zm00001d012869_P005	Maize	mitochondrion	17.17	3.16
Zm00001d006088_P001	Maize	cytosol	1.52	1.48
Zm00001d044362_P001	Maize	extracellular, golgi	0.51	0.93
Zm00001d028053_P001	Maize	mitochondrion	0.51	0.84

Protein Annotations

Gene3D:3.30.200.20	MapMan:35.1	UniProt:A0A1D6KN61	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM04259.1	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24054
PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	UniParc:UPI000843CBF0	EnsemblPlantsGene:Zm00001d032025
EnsemblPlants:Zm00001d032025_P001	EnsemblPlants:Zm00001d032025_T001	SEG:seg	:	:	:

Description

Casein kinase II subunit alpha-4 chloroplastic

Coordinates

chr1:-:209767377..209768625

Molecular Weight (calculated)

23054.7 Da

IEP (calculated)

9.740

GRAVY (calculated)

-0.527

Length

198 amino acids

Sequence
(BLAST)

001: MTSRFGRATR QLGGAASVAR VYADANAQRP KEYWDYESLD IQWGKQDGYE VLRKVGRGKY SEVFEGFWAR SDERCVIKIL KPVNKKKKIN FAFTMLCCGG
101: CHISRNQRYG WNHKSDTRGL PCRATLDYTN IKREIKILYN LYGGPNIVKL LDIVRDDESK TPSLIFEHVN NTDFKVLYPA LSDYDIRYYI FELLKARI

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.