Factsheet for TraesCS3D01G140700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS2A01G240200.1
TraesCS2A01G282200.1
TraesCS2B01G257800.1
TraesCS2B01G299400.1
TraesCS2D01G237900.1
TraesCS2D01G281000.1
TraesCS7A01G134600.1
TraesCS7B01G035800.1
TraesCS7D01G134000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	TraesCS2A01G282200.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2B01G299400.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2D01G281000.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7A01G134600.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7B01G035800.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7D01G134000.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2A01G240200.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS2B01G257800.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS2D01G237900.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT5G58950.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT5G58950.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G158300.1	Wheat	nucleus	97.5	97.5
TraesCS3A01G313600.1	Wheat	cytosol	96.25	96.25
HORVU3Hr1G026870.1	Barley	cytosol	89.29	86.81
Os01t0201200-01	Rice	nucleus	72.14	71.76
KXG31606	Sorghum	cytosol	68.75	67.31
Zm00001d008875_P001	Maize	cytosol	66.43	66.31
Zm00001d039427_P002	Maize	cytosol	66.43	64.81
KRH10889	Soybean	cytosol	41.79	50.65
KRH21427	Soybean	cytosol	41.25	49.89
KRH50054	Soybean	cytosol, plastid	44.29	49.8
KRH20446	Soybean	cytosol, plastid	43.04	48.79
GSMUA_Achr9P05820_001	Banana	cytosol	42.86	48.58
Solyc03g006400.2.1	Tomato	cytosol	41.61	48.54
CDX71145	Canola	cytosol, plastid	41.07	48.52
PGSC0003DMT400033356	Potato	cytosol, plastid	41.79	48.35
CDY32673	Canola	cytosol	41.25	48.12
CDX88676	Canola	cytosol, plastid	41.07	48.12
KRH13893	Soybean	cytosol	28.04	47.87
KRH13899	Soybean	cytosol	28.04	47.87
KRH27396	Soybean	cytosol	23.04	47.6
CDX80321	Canola	cytosol	40.36	47.58
PGSC0003DMT400076363	Potato	cytosol	42.32	47.02
Solyc02g078140.2.1	Tomato	cytosol	42.14	46.83
KRH43461	Soybean	cytosol	27.32	46.65
Bra002606.1-P	Field mustard	cytosol, plastid	41.07	46.56
CDY69707	Canola	cytosol, plastid	41.07	46.56
Bra006738.1-P	Field mustard	cytosol, plastid	41.79	46.52
CDY32674	Canola	cytosol, plastid	40.18	46.11
CDY02848	Canola	cytosol	39.11	45.53
GSMUA_Achr4P30980_001	Banana	cytosol	46.79	45.41
Bra020343.1-P	Field mustard	cytosol, plastid	40.54	44.34
AT5G58950.1	Thale cress	plastid	41.43	44.19
GSMUA_Achr10P...	Banana	cytosol	43.75	43.67
GSMUA_Achr2P15610_001	Banana	cytosol	45.71	43.61
CDX86103	Canola	cytosol	33.93	40.77
CDX99086	Canola	cytosol, plastid	32.32	40.67
AT3G46930.2	Thale cress	cytosol	36.79	40.0
Bra018183.1-P	Field mustard	cytosol	33.75	38.73
TraesCS3D01G010000.1	Wheat	cytosol	24.46	37.64
TraesCS3D01G273200.1	Wheat	cytosol	40.36	37.6
TraesCS1D01G341600.1	Wheat	nucleus	39.11	36.62
TraesCS7D01G384700.1	Wheat	mitochondrion	24.82	35.1
TraesCS6D01G161600.1	Wheat	mitochondrion	24.11	34.44
TraesCS2D01G588700.1	Wheat	cytosol	16.96	31.88
TraesCS6D01G192100.1	Wheat	cytosol	19.82	31.71
TraesCS7D01G289500.1	Wheat	cytosol	23.21	31.25
GSMUA_Achr6P26170_001	Banana	cytosol	41.25	30.97
TraesCS6D01G145100.2	Wheat	cytosol	22.5	30.14
TraesCS7D01G474700.1	Wheat	cytosol	22.68	29.88
TraesCS5D01G482000.1	Wheat	cytosol	19.11	25.6
TraesCS6D01G070000.1	Wheat	cytosol	22.86	22.15
TraesCS7D01G323500.1	Wheat	cytosol	20.71	21.64
TraesCS5D01G343000.1	Wheat	cytosol	23.04	21.43
TraesCS5D01G132600.2	Wheat	cytosol	19.82	21.06
TraesCS2D01G588200.1	Wheat	cytosol	21.96	20.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581
PANTHER:PTHR44581:SF3	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS3D01G140700	EnsemblPlants:TraesCS3D01G140700.1	TIGR:cd13999	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:+:102779243..102781491

Molecular Weight (calculated)

62888.5 Da

IEP (calculated)

10.178

GRAVY (calculated)

-0.550

Length

560 amino acids

Sequence
(BLAST)

001: MDTENSWVRR TKFSHTVYTR VASHGVHVAP LGRDVEQRLQ RFVSMGKSVT MPIDRGNDER VAALKHTASL PSLRSSLQPN EKKASKQKMS LEIPLSPPAK
101: SEKSKAPRAR SLVKSPSSMM LLSYLNNAHT SQGSNLRQKA NGSHHKLRSK SPLPSVVPSD TFREARASSQ RFTSPPPKRV GSDKSVYGKS LGREGCDMGP
201: SPDWCSTPVV SDKHNSQKDS SWTRRYFDNG GRRRVSAVET VRSRTVSMAQ AVQSTVDWEL DPTKLLVGHR FASGAHSRLY RGLYDDKPVA LKFIRRPKND
301: AGGIIAAKLD KQYNTEVNAL SHLHHKHVIK LVAAHRVGPV YYIITELLPG GSLRSYLHNP EHCPLPLERT ISIALEIARG LEYIHSQGVV HRDIKPENIL
401: FDEKFEVKIA DFGIACEETL CDLLVDDEGT YRWMAPEMLK RKPYNRKVDV YSFGLLLWEM VTGRIPFENL SPVQVAYAVA NNNKKAMEPE DYCPAAVRPL
501: IEQCCALQPE KRPDFWQIVK TLEKIQSVMS QGGCLDALRS SDHKKGLKHW IQKLKPSHGA

Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)

001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA

Arabidopsis Description

At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.