CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92440
KRG96225
KRH24392
KRH29374
KRH34357
KRH51475
KRH60786
KRH67971

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	KRG96225	AT3G11590.1	21798944
AT5G58950.1	KRH67971	AT3G11590.1	21798944
AT5G58950.1	KRG92440	AT3G22960.1	21798944
AT5G58950.1	KRH34357	AT3G22960.1	21798944
AT5G58950.1	KRH24392	AT4G39050.1	21798944
AT5G58950.1	KRH29374	AT4G39050.1	21798944
AT5G58950.1	KRH51475	AT4G39050.1	21798944
AT5G58950.1	KRH60786	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13893	Soybean	cytosol	92.38	92.38
KRH13899	Soybean	cytosol	92.07	92.07
KRH27396	Soybean	cytosol	64.02	77.49
KRH10889	Soybean	cytosol	57.62	40.91
KRH21427	Soybean	cytosol	56.71	40.17
KRH63510	Soybean	mitochondrion	42.68	39.22
KRH57063	Soybean	mitochondrion	42.07	39.2
KRH36528	Soybean	mitochondrion	44.82	38.99
KRH54406	Soybean	mitochondrion, peroxisome	40.24	38.6
KRH03300	Soybean	peroxisome	42.07	38.44
Solyc03g006400.2.1	Tomato	cytosol	56.1	38.33
OQU87530	Sorghum	cytosol	44.21	38.26
KRH11513	Soybean	mitochondrion	43.9	38.1
KRH02003	Soybean	mitochondrion	44.21	38.06
PGSC0003DMT400033356	Potato	cytosol, plastid	56.1	38.02
KRH51152	Soybean	mitochondrion	43.9	37.8
KRH50054	Soybean	cytosol, plastid	57.01	37.55
KRH20446	Soybean	cytosol, plastid	56.4	37.45
CDX80321	Canola	cytosol	50.91	35.16
KRG93193	Soybean	cytosol	33.23	35.05
CDX71145	Canola	cytosol, plastid	50.61	35.02
CDX88676	Canola	cytosol, plastid	50.61	34.73
CDY02848	Canola	cytosol	50.91	34.72
Solyc02g078140.2.1	Tomato	cytosol	53.05	34.52
CDY32674	Canola	cytosol, plastid	51.22	34.43
GSMUA_Achr9P05820_001	Banana	cytosol	51.83	34.41
PGSC0003DMT400076363	Potato	cytosol	52.74	34.33
CDY32673	Canola	cytosol	50.0	34.17
CDX99086	Canola	cytosol, plastid	46.34	34.16
KRH56528	Soybean	cytosol	35.98	34.1
CDY69707	Canola	cytosol, plastid	50.61	33.6
KRH40751	Soybean	cytosol	37.8	33.51
Bra002606.1-P	Field mustard	cytosol, plastid	50.3	33.4
KRH54319	Soybean	cytosol	35.67	33.24
KRH63627	Soybean	cytosol	35.37	32.95
CDX86103	Canola	cytosol	46.65	32.83
Bra020343.1-P	Field mustard	cytosol, plastid	51.22	32.81
Bra006738.1-P	Field mustard	cytosol, plastid	50.3	32.8
KRH76113	Soybean	cytosol	36.89	32.61
KRG94025	Soybean	cytosol	34.45	32.47
KRH07131	Soybean	cytosol	34.45	32.38
AT5G58950.1	Thale cress	plastid	51.52	32.19
KRH65437	Soybean	cytosol	35.98	31.81
Bra018183.1-P	Field mustard	cytosol	46.34	31.15
KRH60100	Soybean	cytosol	37.5	29.57
GSMUA_Achr4P30980_001	Banana	cytosol	51.22	29.12
KRH41382	Soybean	nucleus	36.89	29.09
GSMUA_Achr2P15610_001	Banana	cytosol	51.83	28.96
GSMUA_Achr10P...	Banana	cytosol	49.39	28.88
Os01t0201200-01	Rice	nucleus	49.39	28.77
AT3G46930.2	Thale cress	cytosol	43.29	27.57
TraesCS3B01G158300.1	Wheat	nucleus	46.95	27.5
TraesCS3D01G140700.1	Wheat	cytosol	46.65	27.32
TraesCS3A01G313600.1	Wheat	cytosol	46.65	27.32
Zm00001d039427_P002	Maize	cytosol	47.56	27.18
KXG31606	Sorghum	cytosol	47.26	27.1
Zm00001d008875_P001	Maize	cytosol	46.34	27.09
HORVU3Hr1G026870.1	Barley	cytosol	44.82	25.52
TraesCS3A01G274000.1	Wheat	cytosol	46.34	25.29
HORVU3Hr1G071240.2	Barley	cytosol	46.34	25.25
TraesCS3D01G273200.1	Wheat	cytosol	45.73	24.96
TraesCS3B01G307700.2	Wheat	cytosol	45.43	24.79
Zm00001d032310_P001	Maize	cytosol	45.12	24.75
KXG22364	Sorghum	cytosol	45.43	24.51
Os05t0519200-02	Rice	cytosol	44.82	24.34
Zm00001d000396_P001	Maize	cytosol	43.6	24.32
TraesCS1B01G351900.1	Wheat	nucleus	44.21	24.25
TraesCS1A01G339600.1	Wheat	cytosol	44.21	24.17
TraesCS1D01G341600.1	Wheat	nucleus	43.9	24.08
HORVU1Hr1G076110.1	Barley	nucleus	43.6	23.79
KRH08313	Soybean	cytosol	28.66	23.68
OQU80422	Sorghum	cytosol	44.82	23.6
Os01t0747400-01	Rice	cytosol	44.82	23.08
Zm00001d038809_P008	Maize	cytosol	45.73	22.59
GSMUA_Achr6P26170_001	Banana	cytosol	50.91	22.39
KRG91637	Soybean	cytosol	32.93	19.39
KRH35162	Soybean	cytosol	34.15	19.21
KRH76579	Soybean	cytosol	32.93	18.91
KRH60972	Soybean	cytosol	30.18	18.61
KRG90640	Soybean	plastid	32.62	18.35
KRH36118	Soybean	cytosol	32.62	18.29
KRH28871	Soybean	cytosol	32.01	16.94

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100814245	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02004865	EnsemblPlantsGene:GLYMA_08G151400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	UniProt:K7L6V4
EnsemblPlants:KRH43461	ProteinID:KRH43461	ProteinID:KRH43461.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002338A09	:	:

Description

hypothetical protein

Coordinates

chr8:-:11636546..11637532

Molecular Weight (calculated)

37735.0 Da

IEP (calculated)

9.939

GRAVY (calculated)

-0.312

Length

328 amino acids

Sequence
(BLAST)

001: MGKLSIKLHD KCKNRKESSS WPLTNCFHHG GGRDDAIGIA QECNVDFSNL FIGRKFSQGA HSQIYHGVYK KEHVAVKFVK VRDNDVKGIP KSLLEAQFLR
101: EVIHLPRLHH QNVVKFIGAY KDTDFYYILT EYQQKGSLRV YLNKVESKPI SLKRVIAFAL DIARGMEYIH AQGIIHRDLK PENVLVDGEI RLKIADFGIA
201: CEASKFDSLR GTYRWMAPEM IKGKRYGRKV DVYSFGLILW ELLSGTVPFE GMNPIQVAVA VADRNSRPII PSHCPHVLSD LIKQCWELKA EKRPEFWQIV
301: RVLEQLDQGC SFLSPKKLKQ HHLSLRKW

Best Arabidopsis Sequence Match ( AT1G62400.1 )
(BLAST)

001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA

Arabidopsis Description

HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.