Factsheet for PGSC0003DMT400033356

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400008772
PGSC0003DMT400072353

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	PGSC0003DMT400072353	AT3G11590.1	21798944
AT5G58950.1	PGSC0003DMT400008772	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g006400.2.1	Tomato	cytosol	95.04	95.83
PGSC0003DMT400076363	Potato	cytosol	77.27	74.21
KRH10889	Soybean	cytosol	66.53	69.7
KRH21427	Soybean	cytosol	66.12	69.11
KRH50054	Soybean	cytosol, plastid	68.8	66.87
KRH20446	Soybean	cytosol, plastid	67.98	66.6
CDX71145	Canola	cytosol, plastid	58.88	60.13
CDX88676	Canola	cytosol, plastid	59.3	60.04
CDY32673	Canola	cytosol	58.88	59.38
CDX80321	Canola	cytosol	58.06	59.16
CDY69707	Canola	cytosol, plastid	59.09	57.89
Bra002606.1-P	Field mustard	cytosol, plastid	58.88	57.69
CDY32674	Canola	cytosol, plastid	58.06	57.58
Bra006738.1-P	Field mustard	cytosol, plastid	59.71	57.46
CDY02848	Canola	cytosol	57.02	57.38
KRH13899	Soybean	cytosol	38.43	56.71
KRH13893	Soybean	cytosol	38.43	56.71
KRH43461	Soybean	cytosol	38.02	56.1
Bra020343.1-P	Field mustard	cytosol, plastid	58.68	55.47
KRH27396	Soybean	cytosol	30.99	55.35
GSMUA_Achr9P05820_001	Banana	cytosol	56.2	55.06
AT5G58950.1	Thale cress	plastid	59.5	54.86
CDX99086	Canola	cytosol, plastid	48.35	52.58
CDX86103	Canola	cytosol	49.59	51.5
OQU87530	Sorghum	cytosol	39.67	50.66
GSMUA_Achr10P...	Banana	cytosol	58.06	50.09
Bra018183.1-P	Field mustard	cytosol	50.21	49.8
GSMUA_Achr2P15610_001	Banana	cytosol	59.5	49.06
GSMUA_Achr4P30980_001	Banana	cytosol	57.44	48.18
AT3G46930.2	Thale cress	cytosol	50.21	47.18
PGSC0003DMT400062959	Potato	cytosol, mitochondrion	32.85	45.3
PGSC0003DMT400060698	Potato	cytosol	30.58	43.53
Os01t0201200-01	Rice	nucleus	50.62	43.52
PGSC0003DMT400034519	Potato	cytosol	30.17	43.2
TraesCS3B01G158300.1	Wheat	nucleus	48.55	41.96
TraesCS3D01G140700.1	Wheat	cytosol	48.35	41.79
KXG31606	Sorghum	cytosol	48.76	41.26
TraesCS3A01G313600.1	Wheat	cytosol	47.73	41.25
HORVU3Hr1G071240.2	Barley	cytosol	50.83	40.86
TraesCS3A01G274000.1	Wheat	cytosol	50.62	40.77
TraesCS3B01G307700.2	Wheat	cytosol	50.41	40.6
Zm00001d008875_P001	Maize	cytosol	46.9	40.46
TraesCS3D01G273200.1	Wheat	cytosol	50.21	40.43
Zm00001d039427_P002	Maize	cytosol	47.11	39.72
Zm00001d032310_P001	Maize	cytosol	48.76	39.46
HORVU3Hr1G026870.1	Barley	cytosol	46.49	39.06
KXG22364	Sorghum	cytosol	48.97	38.98
Zm00001d000396_P001	Maize	cytosol	47.31	38.95
OQU80422	Sorghum	cytosol	49.38	38.36
TraesCS1B01G351900.1	Wheat	nucleus	46.9	37.96
TraesCS1D01G341600.1	Wheat	nucleus	46.69	37.79
PGSC0003DMT400007577	Potato	cytosol	28.93	37.74
TraesCS1A01G339600.1	Wheat	cytosol	46.69	37.67
HORVU1Hr1G076110.1	Barley	nucleus	45.87	36.94
Os01t0747400-01	Rice	cytosol	48.55	36.89
Os05t0519200-02	Rice	cytosol	45.87	36.76
PGSC0003DMT400007578	Potato	cytosol	29.96	36.25
PGSC0003DMT400022377	Potato	cytosol	23.97	35.91
GSMUA_Achr6P26170_001	Banana	cytosol	55.17	35.79
Zm00001d038809_P008	Maize	cytosol	48.35	35.24
PGSC0003DMT400032824	Potato	cytosol	24.38	33.43
PGSC0003DMT400032959	Potato	cytosol	22.93	29.84
PGSC0003DMT400007574	Potato	cytosol	18.18	28.3
PGSC0003DMT400048730	Potato	cytosol	30.58	26.33
PGSC0003DMT400047982	Potato	cytosol	30.58	26.24

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102600221	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1AZ06	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400012813	PGSC:PGSC0003DMG400012813
EnsemblPlants:PGSC0003DMT400033356	PIRSF:PIRSF000615	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581
PANTHER:PTHR44581:SF2	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002956AC0	RefSeq:XP_006343235.1	SEG:seg	:	:	:

Description

Protein kinase (PK) [Source:PGSC_GENE;Acc:PGSC0003DMG400012813]

Coordinates

chr3:-:1881905..1885819

Molecular Weight (calculated)

54810.7 Da

IEP (calculated)

9.932

GRAVY (calculated)

-0.516

Length

484 amino acids

Sequence
(BLAST)

001: MDEEANSWIR RTKFSHTICH RLDAARLSSS PVSFQPRSIT GAKTRPGTAS LNSRPDPTVK QIQQNPSTNK QRALSPLPKT KLPDTFKEAR SDQRRFSTPH
101: PQRKGHEKGI VGKLFLKDSH EKKIASSGSA ISKSAAKFND KSKNRNRKDS AWTKYFDHNG RRVTAVETAD EYTVDLSKLF LGLRFAHGAH SQLYHGIYRD
201: EPVAVKMIKL PDDDENGALA TRLENQFTRE VTLLSQLHHQ NVVKFVGACR KTPVFCVVTE YLSEGSLRAH LHKLEDKSLT LQKLIALALD IAHGMQYIHS
301: QGIIHRDLKP ENILIDENFH LKIADFGIAC EEAYCDLLAD DPGTYRWMAP EMIKRKSYGR KVDVYSFGLI LWEMVAGTVP YEDMTPVQAA FAVVNKNMRP
401: PIPGACPLAM RTLIEQCWSL QPEKRPEFWQ IVKVLEQFES SVAQDGTLNL VQNSMFHHKK GFLHWIQKLG SVHQNASSKS KAFS

Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)

001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA

Arabidopsis Description

At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.