Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43461 | Soybean | cytosol | 77.49 | 64.02 |
| KRH13899 | Soybean | cytosol | 77.49 | 64.02 |
| KRH13893 | Soybean | cytosol | 77.49 | 64.02 |
| KRH57063 | Soybean | mitochondrion | 42.8 | 32.95 |
| KRH10889 | Soybean | cytosol | 55.72 | 32.68 |
| KRH03300 | Soybean | peroxisome | 42.44 | 32.03 |
| KRH21427 | Soybean | cytosol | 54.61 | 31.97 |
| KRH63510 | Soybean | mitochondrion | 41.7 | 31.65 |
| Solyc03g006400.2.1 | Tomato | cytosol | 55.72 | 31.46 |
| PGSC0003DMT400033356 | Potato | cytosol, plastid | 55.35 | 30.99 |
| KRH36528 | Soybean | mitochondrion | 42.8 | 30.77 |
| OQU87530 | Sorghum | cytosol | 42.8 | 30.61 |
| KRH20446 | Soybean | cytosol, plastid | 55.72 | 30.57 |
| KRH11513 | Soybean | mitochondrion | 42.44 | 30.42 |
| KRH50054 | Soybean | cytosol, plastid | 55.72 | 30.32 |
| KRH51152 | Soybean | mitochondrion | 42.44 | 30.18 |
| KRH02003 | Soybean | mitochondrion | 42.44 | 30.18 |
| KRH54406 | Soybean | mitochondrion, peroxisome | 38.01 | 30.12 |
| KRG93193 | Soybean | cytosol | 32.47 | 28.3 |
| PGSC0003DMT400076363 | Potato | cytosol | 52.03 | 27.98 |
| Solyc02g078140.2.1 | Tomato | cytosol | 51.66 | 27.78 |
| KRH56528 | Soybean | cytosol | 35.42 | 27.75 |
| GSMUA_Achr9P05820_001 | Banana | cytosol | 50.55 | 27.73 |
| CDY02848 | Canola | cytosol | 49.08 | 27.65 |
| CDX80321 | Canola | cytosol | 48.34 | 27.58 |
| KRH40751 | Soybean | cytosol | 37.27 | 27.3 |
| CDY32674 | Canola | cytosol, plastid | 49.08 | 27.25 |
| CDX71145 | Canola | cytosol, plastid | 47.23 | 27.0 |
| CDY32673 | Canola | cytosol | 47.6 | 26.88 |
| CDX88676 | Canola | cytosol, plastid | 47.23 | 26.78 |
| KRH54319 | Soybean | cytosol | 34.69 | 26.7 |
| KRH76113 | Soybean | cytosol | 36.53 | 26.68 |
| KRG94025 | Soybean | cytosol | 33.95 | 26.44 |
| KRH63627 | Soybean | cytosol | 34.32 | 26.42 |
| CDY69707 | Canola | cytosol, plastid | 47.97 | 26.32 |
| Bra002606.1-P | Field mustard | cytosol, plastid | 47.97 | 26.32 |
| CDX99086 | Canola | cytosol, plastid | 43.17 | 26.29 |
| Bra020343.1-P | Field mustard | cytosol, plastid | 49.08 | 25.98 |
| KRH65437 | Soybean | cytosol | 35.42 | 25.88 |
| KRH07131 | Soybean | cytosol | 33.21 | 25.79 |
| Bra006738.1-P | Field mustard | cytosol, plastid | 46.86 | 25.25 |
| AT5G58950.1 | Thale cress | plastid | 48.71 | 25.14 |
| CDX86103 | Canola | cytosol | 42.8 | 24.89 |
| KRH60100 | Soybean | cytosol | 37.27 | 24.28 |
| Os01t0201200-01 | Rice | nucleus | 49.82 | 23.98 |
| Bra018183.1-P | Field mustard | cytosol | 42.8 | 23.77 |
| KRH41382 | Soybean | nucleus | 36.16 | 23.56 |
| GSMUA_Achr4P30980_001 | Banana | cytosol | 49.82 | 23.4 |
| TraesCS3B01G158300.1 | Wheat | nucleus | 48.34 | 23.39 |
| TraesCS3A01G313600.1 | Wheat | cytosol | 47.97 | 23.21 |
| TraesCS3D01G140700.1 | Wheat | cytosol | 47.6 | 23.04 |
| GSMUA_Achr10P... | Banana | cytosol | 47.23 | 22.82 |
| GSMUA_Achr2P15610_001 | Banana | cytosol | 49.08 | 22.66 |
| AT3G46930.2 | Thale cress | cytosol | 42.8 | 22.52 |
| Zm00001d039427_P002 | Maize | cytosol | 47.6 | 22.47 |
| KXG31606 | Sorghum | cytosol | 46.49 | 22.03 |
| Zm00001d008875_P001 | Maize | cytosol | 45.39 | 21.93 |
| HORVU3Hr1G026870.1 | Barley | cytosol | 46.13 | 21.7 |
| KXG22364 | Sorghum | cytosol | 47.23 | 21.05 |
| TraesCS1B01G351900.1 | Wheat | nucleus | 46.13 | 20.9 |
| TraesCS1A01G339600.1 | Wheat | cytosol | 46.13 | 20.83 |
| TraesCS1D01G341600.1 | Wheat | nucleus | 45.76 | 20.74 |
| HORVU1Hr1G076110.1 | Barley | nucleus | 45.76 | 20.63 |
| TraesCS3A01G274000.1 | Wheat | cytosol | 45.76 | 20.63 |
| Zm00001d000396_P001 | Maize | cytosol | 44.28 | 20.41 |
| TraesCS3D01G273200.1 | Wheat | cytosol | 45.02 | 20.3 |
| Zm00001d032310_P001 | Maize | cytosol | 44.65 | 20.23 |
| TraesCS3B01G307700.2 | Wheat | cytosol | 44.65 | 20.13 |
| Os05t0519200-02 | Rice | cytosol | 44.28 | 19.87 |
| HORVU3Hr1G071240.2 | Barley | cytosol | 43.91 | 19.77 |
| OQU80422 | Sorghum | cytosol | 44.28 | 19.26 |
| Os01t0747400-01 | Rice | cytosol | 45.02 | 19.15 |
| Zm00001d038809_P008 | Maize | cytosol | 46.49 | 18.98 |
| GSMUA_Achr6P26170_001 | Banana | cytosol | 50.92 | 18.5 |
| KRH08313 | Soybean | cytosol | 25.83 | 17.63 |
| KRH60972 | Soybean | cytosol | 30.63 | 15.6 |
| KRG91637 | Soybean | cytosol | 31.37 | 15.26 |
| KRH35162 | Soybean | cytosol | 32.47 | 15.09 |
| KRH76579 | Soybean | cytosol | 31.37 | 14.89 |
| KRG90640 | Soybean | plastid | 30.63 | 14.24 |
| KRH36118 | Soybean | cytosol | 30.63 | 14.19 |
| KRH28871 | Soybean | cytosol | 30.63 | 13.39 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.30 | UniProt:A0A0R0HLQ5 | EMBL:ACUP02007803 | EnsemblPlantsGene:GLYMA_12G233200 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR000719 | EnsemblPlants:KRH27396 | ProteinID:KRH27396 | ProteinID:KRH27396.1 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | PIRSF:PIRSF000654 | PRINTS:PR00109 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR44581 |
| InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0006EDB585 |
Description
hypothetical protein
Coordinates
chr12:-:39231934..39232852
Molecular Weight (calculated)
30965.2 Da
IEP (calculated)
8.406
GRAVY (calculated)
-0.364
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKLSIKLHD KCRNRKESSW PLTKCFHHGG RKDATVRNAQ DQWNVDFSNL FIGHKFSQGA HSQIYHEVTH LPRLHHQNVV KYVAACKDTH FYFILTEYQQ
101: KGSLRVYLNK LEHKPISSKK VISFALDIAH GMEYVHAQGI IHRDLKPENV LVDGELHPKI ADFGISCEAS KCDSLRGTYR WMAPEMIKGK RYGREVDVYS
201: FGLILWELVS GTVPFEDMGP CQVAVAVANR NSRPIIPSDY PHILVCIDGT MNVVQRHCSE DHSHLFLMEG S
101: KGSLRVYLNK LEHKPISSKK VISFALDIAH GMEYVHAQGI IHRDLKPENV LVDGELHPKI ADFGISCEAS KCDSLRGTYR WMAPEMIKGK RYGREVDVYS
201: FGLILWELVS GTVPFEDMGP CQVAVAVANR NSRPIIPSDY PHILVCIDGT MNVVQRHCSE DHSHLFLMEG S
001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA
Arabidopsis Description
HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.