CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, mitochondrion

Predictor Summary:

plastid 1
peroxisome 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63510	Soybean	mitochondrion	97.66	93.56
KRH57063	Soybean	mitochondrion	79.82	77.56
KRH03300	Soybean	peroxisome	79.82	76.04
VIT_17s0000g08240.t01	Wine grape	cytosol	77.19	73.74
Solyc03g114310.2.1	Tomato	cytosol	73.39	71.51
PGSC0003DMT400062959	Potato	cytosol, mitochondrion	72.22	70.37
GSMUA_Achr2P22880_001	Banana	cytosol	68.71	66.01
GSMUA_Achr8P18690_001	Banana	cytosol	66.96	65.06
EES00452	Sorghum	cytosol	68.13	63.14
Zm00001d040160_P001	Maize	cytosol	67.84	63.04
TraesCS3D01G010000.1	Wheat	cytosol	66.37	62.36
TraesCS3A01G001500.1	Wheat	cytosol	66.37	62.19
HORVU3Hr1G000350.2	Barley	cytosol, mitochondrion, nucleus	66.37	61.85
TraesCS3B01G000400.1	Wheat	cytosol	66.37	61.19
KRH36528	Soybean	mitochondrion	52.63	47.75
KRH11513	Soybean	mitochondrion	52.34	47.35
KRH02003	Soybean	mitochondrion	52.05	46.72
KRH51152	Soybean	mitochondrion	51.17	45.93
KRH13893	Soybean	cytosol	38.6	40.24
KRH43461	Soybean	cytosol	38.6	40.24
KRH13899	Soybean	cytosol	38.3	39.94
KRH27396	Soybean	cytosol	30.12	38.01
KRG93193	Soybean	cytosol	32.46	35.69
KRH10889	Soybean	cytosol	47.95	35.5
KRH21427	Soybean	cytosol	47.95	35.42
KRH54319	Soybean	cytosol	34.8	33.81
KRH41382	Soybean	nucleus	40.94	33.65
KRG94025	Soybean	cytosol	34.21	33.62
KRH56528	Soybean	cytosol	33.92	33.53
KRH60100	Soybean	cytosol	40.64	33.41
KRH63627	Soybean	cytosol	34.21	33.24
KRH07131	Soybean	cytosol	33.92	33.24
KRH76113	Soybean	cytosol	35.96	33.15
KRH40751	Soybean	cytosol	35.67	32.97
KRH65437	Soybean	cytosol	35.38	32.61
KRH50054	Soybean	cytosol, plastid	45.91	31.53
KRH20446	Soybean	cytosol, plastid	45.32	31.38
KRH08313	Soybean	cytosol	27.49	23.68
KRH60972	Soybean	cytosol	33.63	21.62
KRG91637	Soybean	cytosol	34.8	21.36
KRH76579	Soybean	cytosol	35.38	21.19
KRH35162	Soybean	cytosol	34.8	20.41
KRH36118	Soybean	cytosol	34.21	20.0
KRG90640	Soybean	plastid	33.63	19.73
KRH28871	Soybean	cytosol	35.09	19.35

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	UniProt:A0A0R0JIU6	EMBL:ACUP02003517	EnsemblPlantsGene:GLYMA_06G182900
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KRH54406	ProteinID:KRH54406	ProteinID:KRH54406.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR23257
PANTHER:PTHR23257:SF702	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0006ED6BDB
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:15722624..15726992

Molecular Weight (calculated)

38819.9 Da

IEP (calculated)

9.150

GRAVY (calculated)

-0.377

Length

342 amino acids

Sequence
(BLAST)

001: MKNLKWHKQI SNSGNKLGRR LSLGEYNRAV SWSKYLVSPG AEIKGEGEEE WSADMSQLLI GSKFASGRHS RIYRGVYKQK DVAIKLISQP EEDEDLAAFL
101: EKQFTSEVSL LLRLGHPNII TFIAACKKPP VFCIITEYLA GGSLGKFLHH QQPNILPLKL VLKLALDIAR GMKYLHSQGI LHRDLKSENL LLGEDMCVKC
201: KRITGTYRWM APEMIKEKHH TKKVDVYSFG IVLWELLTGK TPFDNMTPEQ AAYAVSHKNA RPPLPSECPW AFSDLINRCW SSNPDKRPHF DEIVSILEYY
301: TESLQQDPEF FSTYKPSPSS SNTILGCFPK CNARHKFGAC KA

Best Arabidopsis Sequence Match ( AT1G62400.1 )
(BLAST)

001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA

Arabidopsis Description

HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.