Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42041 | Canola | cytosol | 53.12 | 63.16 |
| Bra004541.1-P | Field mustard | nucleus | 54.56 | 62.44 |
| CDX80013 | Canola | nucleus | 53.26 | 61.5 |
| AT3G61670.1 | Thale cress | nucleus | 48.44 | 47.09 |
| KRG99688 | Soybean | cytosol | 3.91 | 44.12 |
| KRG97141 | Soybean | nucleus | 41.02 | 34.58 |
| KRH68892 | Soybean | nucleus | 40.49 | 34.4 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 33.2 | 32.65 |
| KRH06502 | Soybean | nucleus | 37.24 | 32.06 |
| KRH47938 | Soybean | nucleus | 36.85 | 31.66 |
| AT1G01440.1 | Thale cress | nucleus | 25.91 | 29.97 |
| GSMUA_Achr10P... | Banana | nucleus | 30.21 | 29.59 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 28.91 | 29.29 |
| GSMUA_Achr10P... | Banana | nucleus | 28.39 | 29.03 |
| GSMUA_Achr10P... | Banana | cytosol | 29.04 | 28.74 |
| Os02t0258300-01 | Rice | nucleus | 30.08 | 27.43 |
| PGSC0003DMT400000290 | Potato | nucleus | 35.55 | 27.19 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 24.48 | 27.17 |
| Solyc01g095590.2.1 | Tomato | nucleus | 34.11 | 27.09 |
| AT4G01090.1 | Thale cress | nucleus | 25.13 | 27.03 |
| Zm00001d053382_P002 | Maize | nucleus | 29.04 | 27.03 |
| TraesCS7A01G336000.1 | Wheat | nucleus | 29.95 | 26.96 |
| TraesCS7B01G247600.1 | Wheat | cytosol | 29.3 | 26.75 |
| TraesCS7D01G343700.1 | Wheat | cytosol | 29.56 | 26.74 |
| Zm00001d016081_P002 | Maize | nucleus | 29.43 | 26.53 |
| KXG29961 | Sorghum | nucleus | 29.82 | 26.5 |
| TraesCS7A01G351500.1 | Wheat | nucleus | 28.39 | 26.49 |
| TraesCS7B01G276600.1 | Wheat | nucleus | 28.26 | 26.21 |
| TraesCS7D01G371500.1 | Wheat | nucleus | 28.12 | 26.12 |
| EER88427 | Sorghum | nucleus | 26.95 | 26.0 |
| Os06t0524300-01 | Rice | nucleus | 27.08 | 25.65 |
| HORVU0Hr1G021800.1 | Barley | nucleus | 27.21 | 25.64 |
| Zm00001d046072_P001 | Maize | cytosol | 26.69 | 25.4 |
| HORVU7Hr1G082720.10 | Barley | cytosol, nucleus | 27.86 | 25.06 |
| EES03295 | Sorghum | nucleus | 24.35 | 23.43 |
| Os01t0621300-01 | Rice | nucleus | 24.09 | 22.92 |
| Os05t0586400-01 | Rice | nucleus | 23.05 | 22.69 |
| Zm00001d044191_P004 | Maize | nucleus | 23.31 | 22.54 |
| Zm00001d011373_P002 | Maize | nucleus | 23.44 | 22.19 |
| TraesCS3B01G253700.2 | Wheat | nucleus | 22.92 | 22.11 |
| TraesCS1D01G434200.2 | Wheat | nucleus | 22.14 | 21.74 |
| TraesCS1A01G425200.2 | Wheat | nucleus | 22.14 | 21.6 |
| KXG22639 | Sorghum | nucleus | 22.27 | 21.59 |
| TraesCS3D01G229400.1 | Wheat | nucleus | 22.4 | 21.58 |
| TraesCS1B01G459600.2 | Wheat | plastid | 22.01 | 21.5 |
| HORVU3Hr1G055550.3 | Barley | nucleus | 22.14 | 21.44 |
| Zm00001d009716_P001 | Maize | nucleus | 21.22 | 21.34 |
| HORVU1Hr1G092980.14 | Barley | plastid | 23.05 | 20.18 |
| TraesCS3A01G224200.2 | Wheat | nucleus | 21.48 | 19.78 |
Protein Annotations
| MapMan:35.2 | EntrezGene:819246 | UniProt:A0A178W1W9 | ProteinID:AEC10688.1 | EMBL:AK226789 | ProteinID:ANM62730.1 |
| ArrayExpress:AT2G46380 | EnsemblPlantsGene:AT2G46380 | RefSeq:AT2G46380 | TAIR:AT2G46380 | RefSeq:AT2G46380-TAIR-G | EnsemblPlants:AT2G46380.1 |
| TAIR:AT2G46380.1 | Unigene:At.66424 | ncoils:Coil | GO:GO:0005575 | RefSeq:NP_001324868.1 | RefSeq:NP_182161.3 |
| ProteinID:OAP11112.1 | PFAM:PF11331 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF3 | UniProt:Q0WVG1 |
| SUPFAM:SSF57850 | UniParc:UPI0000DB50E3 | InterPro:Zinc_ribbon_12 | SEG:seg | : | : |
Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
Coordinates
chr2:+:19039024..19042348
Molecular Weight (calculated)
85313.6 Da
IEP (calculated)
7.856
GRAVY (calculated)
-0.753
Length
768 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.