Factsheet for Bra018395.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45439	Canola	plastid	91.42	86.33
AT2G30660.1	Thale cress	peroxisome	75.87	74.87
Bra018392.1-P	Field mustard	cytosol	74.26	74.46
Bra031802.1-P	Field mustard	cytosol	74.26	73.67
Bra039968.1-P	Field mustard	peroxisome	75.6	70.68
AT2G30650.1	Thale cress	peroxisome	71.58	70.63
Bra039975.1-P	Field mustard	peroxisome	72.39	70.13
PGSC0003DMT400004567	Potato	extracellular	23.59	66.67
PGSC0003DMT400066409	Potato	cytosol	23.86	64.03
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	45.04	63.16
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	62.2	62.7
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	63.54	62.53
Solyc01g080930.2.1	Tomato	cytosol	64.08	62.4
KRH07311	Soybean	nucleus	63.0	60.72
GSMUA_Achr5P13900_001	Banana	cytosol	49.87	59.62
PGSC0003DMT400000054	Potato	cytosol	61.13	59.38
PGSC0003DMT400066419	Potato	cytosol	37.53	58.33
PGSC0003DMT400066411	Potato	nucleus	22.79	58.22
Solyc01g094090.2.1	Tomato	cytosol	51.21	58.05
PGSC0003DMT400066414	Potato	cytosol	26.01	56.73
EER91893	Sorghum	cytosol	58.45	56.48
TraesCS1B01G206000.1	Wheat	cytosol	57.64	56.43
TraesCS1D01G194800.2	Wheat	cytosol	57.37	56.17
GSMUA_Achr5P13870_001	Banana	cytosol	58.18	54.94
GSMUA_Achr8P14800_001	Banana	cytosol	58.18	54.66
TraesCS1A01G190800.1	Wheat	plastid	57.37	54.59
Zm00001d007726_P001	Maize	peroxisome	35.66	54.29
PGSC0003DMT400004521	Potato	cytosol	33.24	52.99
Zm00001d021132_P004	Maize	extracellular	57.37	52.97
Zm00001d023779_P001	Maize	extracellular	54.42	52.59
KXG29172	Sorghum	peroxisome	53.62	51.68
Zm00001d007746_P002	Maize	peroxisome	26.27	51.58
PGSC0003DMT400004585	Potato	extracellular	36.73	51.31
OQU84058	Sorghum	mitochondrion	56.03	50.98
HORVU1Hr1G049960.6	Barley	mitochondrion	57.37	50.71
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	9.12	50.0
Zm00001d007732_P002	Maize	extracellular	34.32	44.91
Zm00001d007740_P001	Maize	peroxisome	45.04	44.56
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	46.65	44.5
Os12t0264500-02	Rice	endoplasmic reticulum	56.84	41.33
Bra010664.1-P	Field mustard	cytosol	21.72	39.51
Bra003417.1-P	Field mustard	mitochondrion	42.36	39.5
Zm00001d007728_P001	Maize	cytosol	15.01	39.44
Bra030657.1-P	Field mustard	cytosol	39.14	38.83
Bra010219.1-P	Field mustard	mitochondrion	42.36	38.54
Solyc01g108790.1.1	Tomato	nucleus	17.43	36.93
GSMUA_Achr5P13890_001	Banana	nucleus	15.28	35.62
Bra030656.1-P	Field mustard	cytosol	31.9	32.96
Bra032700.1-P	Field mustard	plastid	35.39	31.21
Bra001946.1-P	Field mustard	plastid	34.05	30.02
Bra030655.1-P	Field mustard	extracellular	10.19	21.23

Protein Annotations

EnsemblPlants:Bra018395.1	EnsemblPlants:Bra018395.1-P	EnsemblPlantsGene:Bra018395	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PFAM:PF16113
SEG:seg	SUPFAM:SSF52096	UniParc:UPI0002547D6E	UniProt:M4DPF4	MapMan:4.2.7.4	MapMan:4.2.7.6.1

Description

AT2G30660 (E=2e-152) | 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative

Coordinates

chrA05:-:7929254..7932357

Molecular Weight (calculated)

41693.6 Da

IEP (calculated)

8.042

GRAVY (calculated)

-0.111

Length

373 amino acids

Sequence
(BLAST)

001: MASETQVLVD DKSSVRILTL NRPKQLNALN SNMITLLMQL FLEYEEDPNV KIVILKGQGR AFCVGGDPLP VFRDIVIQGK SWRVGADFFS EQYKLDHFMA
101: TYSKVQISIL NGIVMGGGAG ISVHGRFRIA TEKTVFAMPE TELGLFPDVG ASYFLSRLPG FFGEYVGLTG ARLDGAEMLA CGLATHFVPS SRLNALEADL
201: CKVGSSDPVT FASAILNAYT KHPKLKQHSA YYRQVLDVID RCFSRRTMEE IISALEKEAT EKPNEWISAT IRALKKASPA SLKISLRSIR EGRFQGVGQC
301: LIQIITTTCL TMQGCRAVVI DKDRNPKWEP RSLEEMKDNM VERYFERVDE EDGWEDLKLS PRKNLPALII AKL

Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)

001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL

Arabidopsis Description

CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.