Factsheet for Bra003417.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67831	Canola	mitochondrion	97.5	97.01
CDY72221	Canola	mitochondrion	49.75	95.67
CDX98420	Canola	mitochondrion	96.0	95.52
AT3G60510.3	Thale cress	mitochondrion	85.75	80.52
Bra010219.1-P	Field mustard	mitochondrion	52.75	51.46
Bra031802.1-P	Field mustard	cytosol	43.25	46.01
Bra018392.1-P	Field mustard	cytosol	40.75	43.82
Bra039968.1-P	Field mustard	peroxisome	42.75	42.86
Bra018395.1-P	Field mustard	cytosol	39.5	42.36
Bra039975.1-P	Field mustard	peroxisome	37.5	38.96
Bra030657.1-P	Field mustard	cytosol	36.0	38.3
Bra010664.1-P	Field mustard	cytosol	17.75	34.63
Bra030656.1-P	Field mustard	cytosol	31.0	34.35
Bra032700.1-P	Field mustard	plastid	31.25	29.55
Bra001946.1-P	Field mustard	plastid	30.75	29.08
Bra030655.1-P	Field mustard	extracellular	12.5	27.93

Protein Annotations

EnsemblPlants:Bra003417.1	EnsemblPlants:Bra003417.1-P	EnsemblPlantsGene:Bra003417	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF4
PFAM:PF16113	SUPFAM:SSF52096	UniParc:UPI00025417EC	UniProt:M4CGT4	MapMan:50.3.1	:

Description

AT3G60510 (E=3e-198) | enoyl-CoA hydratase/isomerase family protein

Coordinates

chrA07:-:13104991..13107741

Molecular Weight (calculated)

44757.9 Da

IEP (calculated)

7.211

GRAVY (calculated)

-0.154

Length

400 amino acids

Sequence
(BLAST)

001: MHNANGFLTR IVRDKQLWRF GYRRSFCSLK VTPDDLDNQV LFEGSGCSRT AILNRPPALN ALTTHMGVRL HKLYKNWEED PNIGFVMMKG SGRAFCAGGD
101: IVSIYHLRKR GSPDAIREFF WTLYNFIYFL GTYLKPHVAI LNGVTMGGGA GVSIPGTFRV ATDRTIFATP ETVIGFHPDA GASFNLSHLP GRLGEYLGLT
201: GLKISGAEML ACGLATHYIS STEVPILEQQ LKKLLTDDPS VVEATLEKSS KSALFPFFFG RIELLEKCFC HDTVEEIIDS LEVEAGRTKD IWCTTTLRRL
301: KETSPLSLKV ALRSVREGRF QTLDQCLIRE YRMSLQGTVG NFSGNFCEGV RARLIDKDEA PKWDPPTLEK VTEDMVDNYF SPLTPAEPDL DLPVKLRESI

Best Arabidopsis Sequence Match ( AT3G60510.1 )
(BLAST)

001: MHNAKGLLGR IVRDKLWRFG YRRSLCSLKL TSEDLDYQVL VEGSGCSRTA ILNRPPALNA LTTHMGYRLQ KLYKNWEEDP NIGFVMMKGS GRAFCAGGDI
101: VSLYHLRTRG SPDAIREFFS SLYSFIYLLG TYLKPHVAIL NGVTMGGGTG VSIPGTFRVA TDRTIFATPE TIIGFHPDAG ASFNLSHLPG RLGEYLGLTG
201: LKLSGAEMLA CGLATHYIRS EEVPVMEEQL KKLLTDDPSV VESCLEKCAE VAHPEKTGVI RRIDLLEKCF SHDTVEEIID SLEIEASRRK DTWCITTLRR
301: LKESSPLSLK VALRSIREGR LQTLDQCLIR EYRMSLQGLI GPMSGNFCEG VRARLIDKDE APKWDPPSLE KVSEDMVDDY FCALTPTEPD LDLPVKLRES
401: I

Arabidopsis Description

ATP-dependent caseinolytic (Clp) protease/crotonase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.