Factsheet for Bra018392.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45442	Canola	mitochondrion	78.76	88.52
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	31.18	77.85
AT2G30660.1	Thale cress	peroxisome	77.96	76.72
Bra031802.1-P	Field mustard	cytosol	76.34	75.53
Bra018395.1-P	Field mustard	cytosol	74.46	74.26
Bra039975.1-P	Field mustard	peroxisome	75.0	72.47
AT2G30650.1	Thale cress	peroxisome	72.04	70.9
Bra039968.1-P	Field mustard	peroxisome	75.81	70.68
PGSC0003DMT400066409	Potato	cytosol	24.19	64.75
PGSC0003DMT400004567	Potato	extracellular	22.85	64.39
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	63.44	63.78
Solyc01g080930.2.1	Tomato	cytosol	63.98	62.14
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	62.9	61.74
PGSC0003DMT400066411	Potato	nucleus	23.92	60.96
GSMUA_Achr5P13900_001	Banana	cytosol	51.08	60.9
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	43.01	60.15
PGSC0003DMT400066419	Potato	cytosol	38.71	60.0
Solyc01g094090.2.1	Tomato	cytosol	51.88	58.66
KRH07311	Soybean	nucleus	61.02	58.66
PGSC0003DMT400000054	Potato	cytosol	60.22	58.33
EER91893	Sorghum	cytosol	59.95	57.77
GSMUA_Achr5P13870_001	Banana	cytosol	61.02	57.47
Zm00001d007726_P001	Maize	peroxisome	37.63	57.14
TraesCS1D01G194800.2	Wheat	cytosol	58.06	56.69
TraesCS1B01G206000.1	Wheat	cytosol	57.8	56.43
Zm00001d023779_P001	Maize	extracellular	57.26	55.18
PGSC0003DMT400066414	Potato	cytosol	25.27	54.97
TraesCS1A01G190800.1	Wheat	plastid	57.8	54.85
Zm00001d007746_P002	Maize	peroxisome	27.96	54.74
Zm00001d021132_P004	Maize	extracellular	59.41	54.7
GSMUA_Achr8P14800_001	Banana	cytosol	58.06	54.41
PGSC0003DMT400004585	Potato	extracellular	37.9	52.81
PGSC0003DMT400004521	Potato	cytosol	33.06	52.56
KXG29172	Sorghum	peroxisome	54.3	52.2
OQU84058	Sorghum	mitochondrion	57.53	52.2
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	9.41	51.47
HORVU1Hr1G049960.6	Barley	mitochondrion	57.8	50.95
Zm00001d007732_P002	Maize	extracellular	37.9	49.47
Zm00001d007740_P001	Maize	peroxisome	50.0	49.34
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	50.81	48.34
Zm00001d007728_P001	Maize	cytosol	17.2	45.07
Os12t0264500-02	Rice	endoplasmic reticulum	58.06	42.11
Bra003417.1-P	Field mustard	mitochondrion	43.82	40.75
Bra010219.1-P	Field mustard	mitochondrion	43.55	39.51
Bra010664.1-P	Field mustard	cytosol	21.24	38.54
Bra030657.1-P	Field mustard	cytosol	37.9	37.5
Bra030656.1-P	Field mustard	cytosol	32.53	33.52
GSMUA_Achr5P13890_001	Banana	nucleus	14.25	33.12
Solyc01g108790.1.1	Tomato	nucleus	15.05	31.82
Bra032700.1-P	Field mustard	plastid	33.33	29.31
Bra001946.1-P	Field mustard	plastid	32.26	28.37
Bra030655.1-P	Field mustard	extracellular	10.48	21.79

Protein Annotations

EnsemblPlants:Bra018392.1	EnsemblPlants:Bra018392.1-P	EnsemblPlantsGene:Bra018392	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF6
PFAM:PF16113	SUPFAM:SSF52096	UniParc:UPI0002547D6B	UniProt:M4DPF1	MapMan:4.2.7.4	MapMan:4.2.7.6.1

Description

AT5G65940 (E=3e-160) CHY1 | CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1); 3-hydroxyisobutyryl-CoA hydrolase

Coordinates

chrA05:-:7906463..7912671

Molecular Weight (calculated)

41966.9 Da

IEP (calculated)

7.236

GRAVY (calculated)

-0.124

Length

372 amino acids

Sequence
(BLAST)

001: MTTAVEMASH SQVLMEDKYT VRILTLNRPN QMNALSWNMI TRLLQLFLAY KDDPRVKLVI LKGQGKAFCA GGDVRPVICD IVQGKWRLGA DFLSDQYTLN
101: YVMATYSKIQ ISIMNGIVMG GGAGVSIHGR FRIATEKTVF AMPETELGLF PDVGASYFLS RLPGFFGEYV GLTGARLDGA EMLACGLATH FVPSTRLTAL
201: EADLCRVVSN DPDTFSSKIL NAYTQHPHLK QHSAYHRHVL DVIDKCFSRR TVEEIISALE REAIQEPDEW ISATLRALKK ASPASLKISL RSIREGRFQE
301: VGQCLIREYR MVCHVLKGEL SKDLVEWEPQ RLEQVTDNMV DQYFKRMDEE EGWEDLKLPP RINLSSSIIA KL

Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)

001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL

Arabidopsis Description

CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.