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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:mitochondrion, peroxisome
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003309_P002
Zm00001d009716_P001
Zm00001d011373_P002
Zm00001d013426_P002
Zm00001d016081_P002
Zm00001d016248_P001
Zm00001d033751_P003
Zm00001d038775_P002
Zm00001d043563_P002
Zm00001d044191_P004
Zm00001d046072_P001
Zm00001d053382_P002

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65940.1 Zm00001d013426_P002 AT1G14830.1 21798944
AT5G65940.1 Zm00001d033751_P003 AT1G14830.1 21798944
AT5G65940.1 Zm00001d003309_P002 AT2G42490.1 21798944
AT5G65940.1 Zm00001d016248_P001 AT2G42790.1 21798944
AT5G65940.1 Zm00001d009716_P001 AT4G01090.1 21798944
AT5G65940.1 Zm00001d011373_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d016081_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d044191_P004 AT4G01090.1 21798944
AT5G65940.1 Zm00001d046072_P001 AT4G01090.1 21798944
AT5G65940.1 Zm00001d053382_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d038775_P002 AT5G56630.1 21798944
AT5G65940.1 Zm00001d043563_P002 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007732_P002 Maize extracellular 67.64 89.47
Zm00001d007726_P001 Maize peroxisome 45.89 70.61
Zm00001d007746_P002 Maize peroxisome 32.63 64.74
Zm00001d007728_P001 Maize cytosol 24.14 64.08
KXG29172 Sorghum peroxisome 64.46 62.79
Zm00001d021132_P004 Maize extracellular 67.11 62.62
PGSC0003DMT400004567 Potato extracellular 21.49 61.36
OQU84058 Sorghum mitochondrion 66.58 61.22
TraesCS1B01G206000.1 Wheat cytosol 61.27 60.63
TraesCS1D01G194800.2 Wheat cytosol 60.48 59.84
PGSC0003DMT400066409 Potato cytosol 22.02 59.71
Zm00001d023779_P001 Maize extracellular 60.74 59.33
TraesCS1A01G190800.1 Wheat plastid 61.54 59.18
GSMUA_Achr5P13900_001 Banana cytosol 45.89 55.45
HORVU1Hr1G049960.6 Barley mitochondrion 60.48 54.03
VIT_09s0002g07160.t01 Wine grape mitochondrion, peroxisome, plastid 51.46 52.43
CDY57769 Canola peroxisome 50.66 51.21
AT2G30660.1 Thale cress peroxisome 50.93 50.79
Solyc01g094090.2.1 Tomato cytosol 44.3 50.76
CDY55104 Canola cytosol 50.13 50.27
Bra031802.1-P Field mustard cytosol 50.13 50.27
PGSC0003DMT400000043 Potato cytosol, mitochondrion, peroxisome 35.28 50.0
Bra018392.1-P Field mustard cytosol 49.34 50.0
CDY45442 Canola mitochondrion 43.77 49.85
AT5G65940.1 Thale cress peroxisome 49.87 49.74
Solyc01g080930.2.1 Tomato cytosol 50.4 49.61
GSMUA_Achr5P13870_001 Banana cytosol 50.4 48.1
KRH07311 Soybean nucleus 49.34 48.06
Solyc01g108800.2.1 Tomato cytoskeleton, cytosol, peroxisome 48.28 48.02
AT2G30650.1 Thale cress peroxisome 47.48 47.35
GSMUA_Achr8P14800_001 Banana cytosol 49.6 47.1
VIT_15s0045g01170.t01 Wine grape cytosol 18.04 46.58
CDY31775 Canola peroxisome 47.21 46.48
PGSC0003DMT400066419 Potato cytosol 29.44 46.25
Bra039975.1-P Field mustard peroxisome 46.95 45.97
PGSC0003DMT400000054 Potato cytosol 46.68 45.83
CDY62818 Canola peroxisome 48.54 45.64
CDY31769 Canola peroxisome 48.28 45.39
Bra039968.1-P Field mustard peroxisome 48.01 45.36
CDX97894 Canola peroxisome 46.68 45.36
Bra018395.1-P Field mustard cytosol 44.56 45.04
Os12t0264500-02 Rice endoplasmic reticulum 61.01 44.83
PGSC0003DMT400066414 Potato cytosol 19.89 43.86
PGSC0003DMT400066411 Potato nucleus 16.98 43.84
CDY45439 Canola plastid 45.89 43.8
CDY71268 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 17.24 43.62
PGSC0003DMT400004585 Potato extracellular 30.5 43.07
PGSC0003DMT400004521 Potato cytosol 26.53 42.73
VIT_15s0045g01190.t01 Wine grape cytosol, nucleus, peroxisome 39.26 37.85
Zm00001d029860_P001 Maize plasma membrane 36.34 33.74
Zm00001d043490_P001 Maize cytosol, extracellular 33.16 32.55
GSMUA_Achr5P13890_001 Banana nucleus 10.34 24.38
PGSC0003DMT400066424 Potato cytosol, nucleus, plastid 3.98 22.06
Solyc01g108790.1.1 Tomato nucleus 9.81 21.02
Zm00001d046456_P009 Maize plastid 23.61 19.91
Protein Annotations
EnsemblPlants:Zm00001d007740_P001EnsemblPlants:Zm00001d007740_T001EnsemblPlantsGene:Zm00001d007740Gene3D:3.90.226.40GO:GO:0003674GO:GO:0003824
GO:GO:0003860GO:GO:0016787InterPro:ClpP/crotonase-like_dom_sfInterPro:HIBYL-CoA-HPANTHER:PTHR43176PANTHER:PTHR43176:SF6
PFAM:PF16113ProteinID:ONM27488.1SEG:segSUPFAM:SSF52096UniParc:UPI0008453528UniProt:A0A1D6F8I4
MapMan:4.2.7.4MapMan:4.2.7.6.1::::
Description
3-hydroxyisobutyryl-CoA hydrolase 1
Coordinates
chr2:-:238496154..238501985
Molecular Weight (calculated)
41469.3 Da
IEP (calculated)
7.803
GRAVY (calculated)
0.109
Length
377 amino acids
Sequence
(BLAST)
001: MDDVGGAAAG GGDSKQIKGL LSCFTAFVKD DGVKLLIMKG SGRAFCAGGD VVAGVQSINN EGWKWGADFF RDQYFLNYII ATCIKPQVSL LTGIVMGGGA
101: GVSLHGKFRV ATDNTVFAMP ETSLGLFPDV GASYFLARLP GFYGEYVALV GARLDGAEML ACGLATHFVP SNRMLLLEES LKKVDTSNSF VVCSIIDQFC
201: QQPSLKQKSS LNRLEIINKC FSNRTVEEII SSLEEVASNS ASKWVAQTIQ YLKKASPTSL KITLRSIREG RTQTVGECLQ REYRMVCHVV RGDFSRDIFE
301: VIKHGHHQHF ALYFVVIVHQ YDGGLFWGAC SGCLQGWNKC MMMQLKSISL GLMIQSGKIW TYLSCVQMEE LWSPSFE
Best Arabidopsis Sequence Match ( AT5G65940.2 )
(BLAST)
001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EVLQAFSI
Arabidopsis Description
CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.