Factsheet for VIT_15s0045g01170.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0047g00370.t01	Wine grape	cytosol, peroxisome, plastid	38.36	46.28
Zm00001d007728_P001	Maize	cytosol	42.47	43.66
GSMUA_Achr5P13900_001	Banana	cytosol	63.7	29.81
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	64.38	25.41
TraesCS1B01G206000.1	Wheat	cytosol	64.38	24.67
TraesCS1D01G194800.2	Wheat	cytosol	64.38	24.67
EER91893	Sorghum	cytosol	64.38	24.35
TraesCS1A01G190800.1	Wheat	plastid	63.7	23.72
GSMUA_Achr8P14800_001	Banana	cytosol	64.38	23.68
GSMUA_Achr5P13870_001	Banana	cytosol	63.01	23.29
Zm00001d021132_P004	Maize	extracellular	64.38	23.27
HORVU1Hr1G049960.6	Barley	mitochondrion	65.07	22.51
Zm00001d023779_P001	Maize	extracellular	57.53	21.76
KXG29172	Sorghum	peroxisome	57.53	21.71
OQU84058	Sorghum	mitochondrion	57.53	20.49
VIT_13s0047g00360.t01	Wine grape	cytosol, peroxisome, plastid	53.42	20.37
VIT_13s0047g00390.t01	Wine grape	endoplasmic reticulum, golgi	51.37	19.79
Zm00001d007740_P001	Maize	peroxisome	46.58	18.04
Os12t0264500-02	Rice	endoplasmic reticulum	61.64	17.54
VIT_15s0021g02440.t01	Wine grape	extracellular, plasma membrane, plastid	19.18	17.28
VIT_13s0047g00410.t01	Wine grape	cytosol	41.78	16.67
VIT_15s0021g02240.t01	Wine grape	mitochondrion	44.52	16.05
VIT_13s0047g00500.t01	Wine grape	cytosol, peroxisome, plastid	38.36	16.0
VIT_04s0008g06610.t01	Wine grape	mitochondrion	44.52	15.97
VIT_12s0028g00590.t01	Wine grape	cytosol	37.67	14.14
VIT_00s0229g00140.t01	Wine grape	mitochondrion	37.67	13.0
VIT_11s0016g04290.t01	Wine grape	mitochondrion	34.25	11.09
VIT_13s0047g00380.t01	Wine grape	cytosol	8.22	10.34
Zm00001d007732_P002	Maize	extracellular	17.81	9.12
GSMUA_Achr5P13890_001	Banana	nucleus	8.9	8.12
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	19.18	7.16
Zm00001d007746_P002	Maize	peroxisome	6.16	4.74
Zm00001d007726_P001	Maize	peroxisome	4.79	2.86

Protein Annotations

ArrayExpress:VIT_15s0045g01170	EMBL:FN596510	EnsemblPlants:VIT_15s0045g01170.t01	EnsemblPlantsGene:VIT_15s0045g01170	Gene3D:3.90.226.40	GO:GO:0003674
GO:GO:0003824	GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176
PANTHER:PTHR43176:SF3	PFAM:PF16113	ProteinID:CCB60786	ProteinID:CCB60786.1	SUPFAM:SSF52096	UniParc:UPI000210974D
UniProt:F6I1G9	MapMan:50.3.1	:	:	:	:

Description

No Description!

Coordinates

chr15:+:6612448..6654692

Molecular Weight (calculated)

15938.4 Da

IEP (calculated)

9.611

GRAVY (calculated)

0.014

Length

146 amino acids

Sequence
(BLAST)

001: MAPPGSTNGD GEQVLVEENL FLRTLILNRP RQLNALSFQM VSKLLELFVA YEDDCNVKLV ILKGNGRAFC AGGDVAAVVR DINGGDWRLG AKFFWKEFIL
101: NYVMATYSKP QVSILNGIVM GGGAGASMHG RFRIATENSS LGRKKP

Best Arabidopsis Sequence Match ( AT2G30660.1 )
(BLAST)

001: MASQSQVLVE EKSSVRILTL NRPKQLNALC FNMISRLLQL FRAYEEDPSV KLVILKGQGR AFCAGGDVPP VVQNMVQGKW RLGADFFRDQ YTLNYVMATY
101: SKPQVSILNG IVMGAGAGVS IHGRFRIATE NTVFAMPETS LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAELLACG LATHFVPSTR LTALETDLCK
201: VGSSDPSFVS TILDAYTQHP HLKQKSAYHR LDVIDRCFSK RTMEEIISAL ERETTQELDD WSLTTIRALK KSSPSSLKIS LRSIREGRLQ GVGHCLTREY
301: RMVCHVMKGD LSKDLVEGCR AILIDKDRNP KWEPRRLEDM KDSMVDQFFE RVEEEERWED LKLSPRNNLH ALRIAAKL

Arabidopsis Description

Probable 3-hydroxyisobutyryl-CoA hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.