Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 4
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_13s0047g00370.t01 | Wine grape | cytosol, peroxisome, plastid | 29.5 | 93.39 |
VIT_13s0047g00410.t01 | Wine grape | cytosol | 80.16 | 83.88 |
VIT_13s0047g00380.t01 | Wine grape | cytosol | 25.07 | 82.76 |
VIT_13s0047g00390.t01 | Wine grape | endoplasmic reticulum, golgi | 80.94 | 81.79 |
VIT_13s0047g00500.t01 | Wine grape | cytosol, peroxisome, plastid | 66.32 | 72.57 |
Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 16.19 | 69.66 |
KRH09309 | Soybean | mitochondrion | 58.22 | 56.03 |
VIT_15s0045g01170.t01 | Wine grape | cytosol | 20.37 | 53.42 |
VIT_09s0002g07160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 51.17 | 52.97 |
Solyc05g032680.2.1 | Tomato | mitochondrion | 15.4 | 52.21 |
VIT_15s0045g01190.t01 | Wine grape | cytosol, nucleus, peroxisome | 43.6 | 42.71 |
VIT_04s0008g06610.t01 | Wine grape | mitochondrion | 43.08 | 40.54 |
VIT_15s0021g02240.t01 | Wine grape | mitochondrion | 42.56 | 40.25 |
VIT_00s0229g00140.t01 | Wine grape | mitochondrion | 43.6 | 39.48 |
VIT_15s0021g02440.t01 | Wine grape | extracellular, plasma membrane, plastid | 16.45 | 38.89 |
VIT_12s0028g00590.t01 | Wine grape | cytosol | 37.86 | 37.28 |
VIT_11s0016g04290.t01 | Wine grape | mitochondrion | 31.33 | 26.61 |
Protein Annotations
EntrezGene:100248996 | wikigene:100248996 | EntrezGene:100260736 | wikigene:100260736 | Gene3D:3.90.226.40 | MapMan:4.2.7.4 |
ProteinID:CCB52182 | ProteinID:CCB52182.1 | InterPro:ClpP/crotonase-like_dom_sf | UniProt:F6HIV7 | EMBL:FN595767 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0003860 | GO:GO:0016787 | InterPro:HIBYL-CoA-H | EntrezGene:LOC100248996 | wikigene:LOC100248996 |
EntrezGene:LOC100260736 | wikigene:LOC100260736 | PFAM:PF16113 | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF6 | SUPFAM:SSF52096 |
TIGR:TC55302 | UniParc:UPI00021090C7 | ArrayExpress:VIT_13s0047g00360 | EnsemblPlantsGene:VIT_13s0047g00360 | EnsemblPlants:VIT_13s0047g00360.t01 | RefSeq:XP_002272658 |
RefSeq:XP_002272658.2 | RefSeq:XP_002272772 | RefSeq:XP_002272772.1 | : | : | : |
Description
No Description!
Coordinates
chr13:+:16251127..16277131
Molecular Weight (calculated)
42954.1 Da
IEP (calculated)
8.335
GRAVY (calculated)
-0.138
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRSLSHPE PNQVLFEESS CVRKVILNRP HKLNSLTYEM ISQILRNLEV YEKDPMVKLL ILKGQGKAFC AGGDVVGMVL SINEGHWSFG ASFYKKQLTL
101: DYLLATSTKP LVSLINGIVM GGGAGLSMNS MFRVVTENTV FAMPEGQIGF FPDVGASYFL SRLPGYFGEY LGLTGARLDG KEMLACGLAT HFVLSKDLLL
201: LENALSEVAS SDASTISRVI SGFSSKISLK KESAYRRLET INKCFSRRTV EEILSMLENE AANGDNKWII QAISSMKSAS PTSLKIFLKL IREGRTKELK
301: DCLIQDYTIA CHMFQRTFNP DFIEGSRAKL FEKGKQPKWE PSKLELVRDD FVNQYFEKVD DADWEYLQLP ARPNLAKTWE SKL
101: DYLLATSTKP LVSLINGIVM GGGAGLSMNS MFRVVTENTV FAMPEGQIGF FPDVGASYFL SRLPGYFGEY LGLTGARLDG KEMLACGLAT HFVLSKDLLL
201: LENALSEVAS SDASTISRVI SGFSSKISLK KESAYRRLET INKCFSRRTV EEILSMLENE AANGDNKWII QAISSMKSAS PTSLKIFLKL IREGRTKELK
301: DCLIQDYTIA CHMFQRTFNP DFIEGSRAKL FEKGKQPKWE PSKLELVRDD FVNQYFEKVD DADWEYLQLP ARPNLAKTWE SKL
001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL
Arabidopsis Description
CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.