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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • peroxisome 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_13s0047g00370.t01 Wine grape cytosol, peroxisome, plastid 29.5 93.39
VIT_13s0047g00410.t01 Wine grape cytosol 80.16 83.88
VIT_13s0047g00380.t01 Wine grape cytosol 25.07 82.76
VIT_13s0047g00390.t01 Wine grape endoplasmic reticulum, golgi 80.94 81.79
VIT_13s0047g00500.t01 Wine grape cytosol, peroxisome, plastid 66.32 72.57
Solyc05g032690.2.1 Tomato cytosol, mitochondrion, nucleus 16.19 69.66
KRH09309 Soybean mitochondrion 58.22 56.03
VIT_15s0045g01170.t01 Wine grape cytosol 20.37 53.42
VIT_09s0002g07160.t01 Wine grape mitochondrion, peroxisome, plastid 51.17 52.97
Solyc05g032680.2.1 Tomato mitochondrion 15.4 52.21
VIT_15s0045g01190.t01 Wine grape cytosol, nucleus, peroxisome 43.6 42.71
VIT_04s0008g06610.t01 Wine grape mitochondrion 43.08 40.54
VIT_15s0021g02240.t01 Wine grape mitochondrion 42.56 40.25
VIT_00s0229g00140.t01 Wine grape mitochondrion 43.6 39.48
VIT_15s0021g02440.t01 Wine grape extracellular, plasma membrane, plastid 16.45 38.89
VIT_12s0028g00590.t01 Wine grape cytosol 37.86 37.28
VIT_11s0016g04290.t01 Wine grape mitochondrion 31.33 26.61
Protein Annotations
EntrezGene:100248996wikigene:100248996EntrezGene:100260736wikigene:100260736Gene3D:3.90.226.40MapMan:4.2.7.4
ProteinID:CCB52182ProteinID:CCB52182.1InterPro:ClpP/crotonase-like_dom_sfUniProt:F6HIV7EMBL:FN595767GO:GO:0003674
GO:GO:0003824GO:GO:0003860GO:GO:0016787InterPro:HIBYL-CoA-HEntrezGene:LOC100248996wikigene:LOC100248996
EntrezGene:LOC100260736wikigene:LOC100260736PFAM:PF16113PANTHER:PTHR43176PANTHER:PTHR43176:SF6SUPFAM:SSF52096
TIGR:TC55302UniParc:UPI00021090C7ArrayExpress:VIT_13s0047g00360EnsemblPlantsGene:VIT_13s0047g00360EnsemblPlants:VIT_13s0047g00360.t01RefSeq:XP_002272658
RefSeq:XP_002272658.2RefSeq:XP_002272772RefSeq:XP_002272772.1:::
Description
No Description!
Coordinates
chr13:+:16251127..16277131
Molecular Weight (calculated)
42954.1 Da
IEP (calculated)
8.335
GRAVY (calculated)
-0.138
Length
383 amino acids
Sequence
(BLAST)
001: MASRSLSHPE PNQVLFEESS CVRKVILNRP HKLNSLTYEM ISQILRNLEV YEKDPMVKLL ILKGQGKAFC AGGDVVGMVL SINEGHWSFG ASFYKKQLTL
101: DYLLATSTKP LVSLINGIVM GGGAGLSMNS MFRVVTENTV FAMPEGQIGF FPDVGASYFL SRLPGYFGEY LGLTGARLDG KEMLACGLAT HFVLSKDLLL
201: LENALSEVAS SDASTISRVI SGFSSKISLK KESAYRRLET INKCFSRRTV EEILSMLENE AANGDNKWII QAISSMKSAS PTSLKIFLKL IREGRTKELK
301: DCLIQDYTIA CHMFQRTFNP DFIEGSRAKL FEKGKQPKWE PSKLELVRDD FVNQYFEKVD DADWEYLQLP ARPNLAKTWE SKL
Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)
001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL
Arabidopsis Description
CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.