CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g032690.2.1	Tomato	cytosol, mitochondrion, nucleus	14.57	65.17
VIT_13s0047g00380.t01	Wine grape	cytosol	17.59	60.34
VIT_13s0047g00410.t01	Wine grape	cytosol	53.77	58.47
VIT_13s0047g00360.t01	Wine grape	cytosol, peroxisome, plastid	56.03	58.22
VIT_13s0047g00370.t01	Wine grape	cytosol, peroxisome, plastid	16.83	55.37
VIT_13s0047g00500.t01	Wine grape	cytosol, peroxisome, plastid	48.49	55.14
VIT_13s0047g00390.t01	Wine grape	endoplasmic reticulum, golgi	51.01	53.56
KRH07311	Soybean	nucleus	47.24	48.58
Solyc05g032680.2.1	Tomato	mitochondrion	13.07	46.02
KRG98957	Soybean	nucleus	39.95	39.65
KRH46020	Soybean	vacuole	39.45	39.45
KRH05370	Soybean	mitochondrion	36.18	35.38
KRH66607	Soybean	mitochondrion	38.19	34.94
KRH15650	Soybean	mitochondrion	35.68	34.89
KRH41609	Soybean	nucleus	29.65	28.92
KRH60315	Soybean	nucleus	29.4	28.68

Protein Annotations

EMBL:ACUP02010275	EnsemblPlants:KRH09309	EnsemblPlantsGene:GLYMA_16G209300	EntrezGene:100811222	Gene3D:3.90.226.40	GO:GO:0003674
GO:GO:0003824	GO:GO:0003860	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF6	PFAM:PF16113	ProteinID:KRH09309
ProteinID:KRH09309.1	SUPFAM:SSF52096	UniParc:UPI0006EDFA5C	UniProt:A0A0R0FT59	MapMan:4.2.7.4	:

Description

hypothetical protein

Coordinates

chr16:-:36857098..36863971

Molecular Weight (calculated)

44923.7 Da

IEP (calculated)

7.831

GRAVY (calculated)

-0.068

Length

398 amino acids

Sequence
(BLAST)

001: MCLIQNLFHY RTIRRKIYMA QSFTLDRDEK QVLFTGNSCV KIVTLNRTQK LNTLNYEMIY QIKKNLQMCE NDPSVKLVIL KANGKAFSAG GDVVSVIMSS
101: LAGHWIYASM FYKKLLTLEY FIATCRKPLV SLINGLVMGA GAGLSINTMF RVVTEKAVFA MPEASIGLFP DVGASYFLSR LPGYFGEYIG LTGAQLDGAE
201: MVACGLATHF VPSVKINTLE NVLQTVTNSN LPIAEVIETF AEKANVKEDS SFRRLEIINK CFSKGTLEEI IICLEKESEN GAEEWIKNAL SSMRSSCPLS
301: LKIFLKSIRT GRVQNIEQCL YRDYTIAGHF LRRTISNDFY EGTRAKLIDK DNKPKWEPSK LELVSEEMVD QCFRDIDEEE MDCLKLPDRS NSQIASRL

Best Arabidopsis Sequence Match ( AT2G30650.1 )
(BLAST)

001: MASHSQVLVE EKSSVRILTF NRPKQLNALS FHMVSRLLQL FLAYEEDPSV KLVVLKGQGR AFSAGGDIPP IVRDILQGKL IRGAHYFKVG YTLNYVLSTY
101: RKPQVSILNG IVMGGGAGLS TNGRFRIATE NTVFAMPETA LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSIS LTALEAELYK
201: VGSSNQTFIS TILDAYAEYP HLNQHSSYHR LDVIDRCFSK RTVEEIFSAL EREVTQKPND WLLATIQALE KASPSCLKIS LRSIREGRLQ GVGQCLIREY
301: RMVCHVMKGD ISKDFVEGCR AVLIDKDRNP KWQPRRLEDV TDSMVDQYFE RVEDEEGWED LKFPPRNNLP ALAIAAKL

Arabidopsis Description

Probable 3-hydroxyisobutyryl-CoA hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEY5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.