Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- peroxisome 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 47.41 | 61.8 |
| VIT_13s0047g00410.t01 | Wine grape | cytosol | 82.76 | 26.23 |
| VIT_13s0047g00390.t01 | Wine grape | endoplasmic reticulum, golgi | 82.76 | 25.33 |
| VIT_13s0047g00360.t01 | Wine grape | cytosol, peroxisome, plastid | 82.76 | 25.07 |
| VIT_13s0047g00500.t01 | Wine grape | cytosol, peroxisome, plastid | 75.0 | 24.86 |
| VIT_09s0002g07160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 56.9 | 17.84 |
| KRH09309 | Soybean | mitochondrion | 60.34 | 17.59 |
| VIT_13s0047g00370.t01 | Wine grape | cytosol, peroxisome, plastid | 17.24 | 16.53 |
| VIT_15s0045g01190.t01 | Wine grape | cytosol, nucleus, peroxisome | 50.86 | 15.09 |
| VIT_15s0021g02440.t01 | Wine grape | extracellular, plasma membrane, plastid | 20.69 | 14.81 |
| VIT_04s0008g06610.t01 | Wine grape | mitochondrion | 47.41 | 13.51 |
| VIT_15s0021g02240.t01 | Wine grape | mitochondrion | 45.69 | 13.09 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 43.1 | 12.85 |
| VIT_00s0229g00140.t01 | Wine grape | mitochondrion | 46.55 | 12.77 |
| VIT_11s0016g04290.t01 | Wine grape | mitochondrion | 37.93 | 9.76 |
| VIT_15s0045g01170.t01 | Wine grape | cytosol | 10.34 | 8.22 |
| Solyc05g032680.2.1 | Tomato | mitochondrion | 0.86 | 0.88 |
Protein Annotations
| ArrayExpress:VIT_13s0047g00380 | EMBL:FN595767 | EnsemblPlants:VIT_13s0047g00380.t01 | EnsemblPlantsGene:VIT_13s0047g00380 | Gene3D:3.90.226.40 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003860 | GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 |
| PANTHER:PTHR43176:SF6 | PFAM:PF16113 | ProteinID:CBI29143 | ProteinID:CBI29143.3 | SUPFAM:SSF52096 | UniParc:UPI0001BE3247 |
| UniProt:D7TF12 | MapMan:50.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chr13:+:16364314..16368453
Molecular Weight (calculated)
12463.2 Da
IEP (calculated)
8.498
GRAVY (calculated)
0.301
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGTGLSMN SMFRVVTENT VLAIPKGQIR LFLDVGASYF LSRLPGFVGE YLGLTGTQLD GNEIIACGLA THFVLSKDLF LLENALSEVA SLDASTISRV
101: INGFSRSLKK DSAFRR
101: INGFSRSLKK DSAFRR
001: MISRLLQLFR AYEEDPSVKL VILKGQGRAF CAGGDVPPVV QNMVQGKWRL GADFFRDQYT LNYVMATYSK PQVSILNGIV MGAGAGVSIH GRFRIATENT
101: VFAMPETSLG LFPDVGASYF LSRLPGFFGE YVGLTGARLD GAELLACGLA THFVPSTRLT ALETDLCKVG SSDPSFVSTI LDAYTQHPHL KQKSAYHRLD
201: VIDRCFSKRT MEEIISALER ETTQELDDWS LTTIRALKKS SPSSLKISLR SIREGRLQGV GHCLTREYRM VCHVMKGDLS KDLVEGCRAI LIDKDRNPKW
301: EPRRLEDMKD SMVDQFFERV EEEERWEDLK LSPRNNLHAL RIAAKL
101: VFAMPETSLG LFPDVGASYF LSRLPGFFGE YVGLTGARLD GAELLACGLA THFVPSTRLT ALETDLCKVG SSDPSFVSTI LDAYTQHPHL KQKSAYHRLD
201: VIDRCFSKRT MEEIISALER ETTQELDDWS LTTIRALKKS SPSSLKISLR SIREGRLQGV GHCLTREYRM VCHVMKGDLS KDLVEGCRAI LIDKDRNPKW
301: EPRRLEDMKD SMVDQFFERV EEEERWEDLK LSPRNNLHAL RIAAKL
Arabidopsis Description
Probable 3-hydroxyisobutyryl-CoA hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.