Factsheet for VIT_15s0021g02440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
cytosol 1
plastid 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	peroxisome
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0021g02240.t01	Wine grape	mitochondrion	72.84	29.14
VIT_04s0008g06610.t01	Wine grape	mitochondrion	56.17	22.36
KRH66607	Soybean	mitochondrion	57.41	21.38
VIT_00s0229g00140.t01	Wine grape	mitochondrion	54.32	20.8
VIT_13s0047g00380.t01	Wine grape	cytosol	14.81	20.69
VIT_15s0045g01170.t01	Wine grape	cytosol	17.28	19.18
VIT_13s0047g00370.t01	Wine grape	cytosol, peroxisome, plastid	14.2	19.01
VIT_13s0047g00410.t01	Wine grape	cytosol	37.65	16.67
VIT_13s0047g00360.t01	Wine grape	cytosol, peroxisome, plastid	38.89	16.45
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	37.04	16.22
VIT_13s0047g00390.t01	Wine grape	endoplasmic reticulum, golgi	37.04	15.83
VIT_13s0047g00500.t01	Wine grape	cytosol, peroxisome, plastid	32.72	15.14
VIT_12s0028g00590.t01	Wine grape	cytosol	35.8	14.91
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	27.78	11.51
VIT_11s0016g04290.t01	Wine grape	mitochondrion	30.25	10.86

Protein Annotations

ArrayExpress:VIT_15s0021g02440	EMBL:FN594952	EnsemblPlants:VIT_15s0021g02440.t01	EnsemblPlantsGene:VIT_15s0021g02440	Gene3D:3.90.226.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176
PANTHER:PTHR43176:SF4	PFAM:PF16113	ProteinID:CCB43850	ProteinID:CCB43850.1	SUPFAM:SSF52096	TMHMM:TMhelix
UniParc:UPI0002109A0D	UniProt:F6GV68	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr15:+:13421491..13434819

Molecular Weight (calculated)

18161.1 Da

IEP (calculated)

6.491

GRAVY (calculated)

0.444

Length

162 amino acids

Sequence
(BLAST)

001: MYLCLCPCYF STSQFISFQG QYIVFFVLLL HGRIEDCKEC FRTVYSFIYL VGTYLNPNVA ILDGITMGSR AGVSILGMFR VATDRTVFAT PETLIGFHTD
101: AGASFHLSHL PGYWGIETLD KCFSRGTVEE IIDALGVRAR MVEKDYAPKV SVVYIIFQYV GG

Best Arabidopsis Sequence Match ( AT4G31810.1 )
(BLAST)

001: MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS
101: GADVLSLYHS INEGNTEESK LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH PDAGASYYLS RLPGYLGEYL
201: ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301: TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL
401: PTAQREPYF

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.