Subcellular Localization
min:
: max
Winner_takes_all: plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P05970_001 | Banana | cytosol | 53.46 | 85.29 |
| TraesCS1A01G252400.1 | Wheat | mitochondrion, plastid | 83.87 | 84.65 |
| KRH11321 | Soybean | cytosol | 49.31 | 77.54 |
| VIT_05s0020g02340.t01 | Wine grape | cytosol | 48.85 | 76.81 |
| Solyc01g080410.2.1 | Tomato | cytosol | 47.47 | 76.3 |
| TraesCS1B01G265600.1 | Wheat | mitochondrion, plastid | 76.96 | 76.26 |
| TraesCS6D01G311300.1 | Wheat | cytosol | 47.0 | 76.12 |
| KRH20953 | Soybean | cytosol | 48.39 | 76.09 |
| CDX94577 | Canola | cytosol | 47.47 | 75.74 |
| AT4G04830.1 | Thale cress | cytosol | 47.0 | 73.38 |
| AT4G04810.1 | Thale cress | cytosol | 43.78 | 68.35 |
| CDX90878 | Canola | cytosol | 44.7 | 68.31 |
| CDY21318 | Canola | cytosol | 44.24 | 67.61 |
| Bra000806.1-P | Field mustard | cytosol | 44.24 | 67.61 |
| CDX76396 | Canola | cytosol, plastid | 44.24 | 66.67 |
| CDY27421 | Canola | cytosol, plastid | 44.24 | 66.67 |
| Bra020868.1-P | Field mustard | cytosol, plastid | 44.24 | 66.67 |
| AT4G21840.1 | Thale cress | cytosol | 41.94 | 63.64 |
| AT4G21850.1 | Thale cress | cytosol | 41.94 | 63.64 |
| AT4G21830.1 | Thale cress | cytosol | 41.94 | 63.19 |
| VIT_00s0282g00010.t01 | Wine grape | plastid | 54.38 | 59.9 |
| AT4G04800.1 | Thale cress | extracellular, plasma membrane, vacuole | 48.39 | 59.66 |
| Bra038753.1-P | Field mustard | plastid | 55.76 | 58.45 |
| Os05t0404200-01 | Rice | plasma membrane | 61.29 | 58.08 |
| Solyc01g106400.2.1 | Tomato | plastid | 45.62 | 57.89 |
| PGSC0003DMT400068883 | Potato | cytosol | 53.0 | 57.5 |
| Zm00001d010336_P001 | Maize | mitochondrion | 57.14 | 57.14 |
| KRH21686 | Soybean | plastid | 53.0 | 56.93 |
| Solyc10g047930.1.1 | Tomato | plastid | 51.61 | 56.85 |
| AT4G21860.1 | Thale cress | plastid | 52.53 | 56.44 |
| CDY16645 | Canola | mitochondrion, plastid | 38.71 | 55.63 |
| AT4G04840.1 | Thale cress | cytosol | 39.17 | 55.56 |
| CDX82871 | Canola | plastid | 51.15 | 55.5 |
| CDX94059 | Canola | plastid | 53.0 | 54.5 |
| KRH10659 | Soybean | plastid | 51.15 | 54.41 |
| PGSC0003DMT400008074 | Potato | plastid | 45.62 | 54.4 |
| EES18201 | Sorghum | mitochondrion | 54.38 | 54.13 |
| CDX98708 | Canola | plastid | 52.53 | 54.03 |
| CDX79099 | Canola | plastid | 52.07 | 53.3 |
| Bra013565.1-P | Field mustard | plastid | 51.61 | 52.34 |
| TraesCS7D01G343600.2 | Wheat | plastid | 28.57 | 31.47 |
Protein Annotations
| Gene3D:2.170.150.20 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006950 | GO:GO:0006979 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 |
| GO:GO:0033743 | GO:GO:0055114 | InterPro:IPR002579 | InterPro:Met_Sox_Rdtase | InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf |
| PFAM:PF01641 | PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF52 | SUPFAM:SSF51316 | TIGRFAMs:TIGR00357 |
| EnsemblPlantsGene:TraesCS1D01G252100 | EnsemblPlants:TraesCS1D01G252100.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:+:344592906..344595873
Molecular Weight (calculated)
23051.3 Da
IEP (calculated)
8.748
GRAVY (calculated)
-0.314
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVQHLLKL RMASPHAHPA TRPLSSLPSL LLARSSSAAT AAASSARPAS LSLSCSRSRA RAYCPAGRRL PGAVVAMSSA APTPGPVQKS EEEWEAVLTP
101: EQFRILRRKG TEYPGTGEYD KFFSEGIYGC AGCGTPLYKS STKFNSGCGW PAFYEGFPGA IKRTADPDGR RIEITCAACE GHLGHVFKGE GFNTPTDERH
201: CVNSISLKFV PASEEAS
101: EQFRILRRKG TEYPGTGEYD KFFSEGIYGC AGCGTPLYKS STKFNSGCGW PAFYEGFPGA IKRTADPDGR RIEITCAACE GHLGHVFKGE GFNTPTDERH
201: CVNSISLKFV PASEEAS
001: MAFNIITPGR VYSATSLTFV STIKAAFVKP PLASPSRRNL LRFSSSPLSF PSLRRGFHGG RIVAMGSSAP ESVNKPEEEW RAILSPEQFR ILRQKGTEYP
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL
Arabidopsis Description
MSRB2Peptide methionine sulfoxide reductase B2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.