CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013565.1-P	Field mustard	plastid	88.21	87.38
GSMUA_Achr8P05970_001	Banana	cytosol	53.3	83.09
CDX82871	Canola	plastid	77.83	82.5
CDX94577	Canola	cytosol	48.58	75.74
CDX90878	Canola	cytosol	49.06	73.24
CDY21318	Canola	cytosol	49.06	73.24
CDX98708	Canola	plastid	70.75	71.09
CDX94059	Canola	plastid	70.28	70.62
CDX76396	Canola	cytosol, plastid	47.17	69.44
CDY27421	Canola	cytosol, plastid	47.17	69.44
AT4G21860.1	Thale cress	plastid	65.09	68.32
PGSC0003DMT400068883	Potato	cytosol	58.49	62.0
Solyc01g106400.2.1	Tomato	plastid	49.06	60.82
Solyc10g047930.1.1	Tomato	plastid	55.19	59.39
KRH21686	Soybean	plastid	55.19	57.92
VIT_00s0282g00010.t01	Wine grape	plastid	53.3	57.36
CDY16645	Canola	mitochondrion, plastid	40.57	56.95
KRH10659	Soybean	plastid	54.72	56.86
PGSC0003DMT400008074	Potato	plastid	48.11	56.04
TraesCS1A01G252400.1	Wheat	mitochondrion, plastid	56.13	55.35
EES18201	Sorghum	mitochondrion	55.19	53.67
Zm00001d010336_P001	Maize	mitochondrion	54.25	53.0
TraesCS1D01G252100.1	Wheat	mitochondrion, plastid	53.3	52.07
Os05t0404200-01	Rice	plasma membrane	55.66	51.53
TraesCS1B01G265600.1	Wheat	mitochondrion, plastid	50.94	49.32
CDY24080	Canola	plastid	27.83	28.92
CDY45127	Canola	plastid	27.36	28.43

Protein Annotations

Gene3D:2.170.150.20	MapMan:35.1	GO:A0A078CSV8	EnsemblPlants:CDX79099	ProteinID:CDX79099	ProteinID:CDX79099.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016671	GO:GO:0019538	GO:GO:0030091	GO:GO:0033743	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00131642001	InterPro:IPR002579	InterPro:Met_Sox_Rdtase	InterPro:Met_Sox_Rdtase_MsrB	InterPro:Mss4-like_sf	PFAM:PF01641
PFscan:PS51790	PANTHER:PTHR10173	PANTHER:PTHR10173:SF52	SUPFAM:SSF51316	TIGRFAMs:TIGR00357	UniParc:UPI00016EB187
SEG:seg	:	:	:	:	:

Description

BnaA01g11660D

Coordinates

chrLK031816:-:1782340..1783403

Molecular Weight (calculated)

22770.0 Da

IEP (calculated)

9.081

GRAVY (calculated)

-0.304

Length

212 amino acids

Sequence
(BLAST)

001: MALNVISSSS SATSISMTFA STIRAFVRPS LSLRTTPFAR SPSKLNLLPL PASPSSFPPL RLRSRGFHGG RVTAMSSPAP GSVNKPEEEW RAILSPEQFR
101: ILRQKGTEYP GTGEYNKLFE DGIYSCAGCG TPLYKSATKF DSGCGWPAFF DGLPGAINRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS
201: VSLKFAPGNQ DL

Best Arabidopsis Sequence Match ( AT4G21860.3 )
(BLAST)

001: MAFNIITPGR VYSATSLTFV STIKAAFVKP PLASPSRRNL LRFSSSPLSF PSLRRGFHGG RIVAMGSSAP ESVNKPEEEW RAILSPEQFR ILRQKGTEYP
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL

Arabidopsis Description

MSRB2Peptide methionine sulfoxide reductase B2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.