Factsheet for Bra013565.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79099	Canola	plastid	87.38	88.21
GSMUA_Achr8P05970_001	Banana	cytosol	53.27	83.82
CDX82871	Canola	plastid	77.57	83.0
Bra000806.1-P	Field mustard	cytosol	48.6	73.24
Bra020868.1-P	Field mustard	cytosol, plastid	46.73	69.44
Bra038753.1-P	Field mustard	plastid	66.82	69.08
AT4G21860.1	Thale cress	plastid	64.49	68.32
Solyc01g106400.2.1	Tomato	plastid	48.6	60.82
PGSC0003DMT400068883	Potato	cytosol	56.54	60.5
Solyc10g047930.1.1	Tomato	plastid	55.14	59.9
VIT_00s0282g00010.t01	Wine grape	plastid	53.74	58.38
KRH21686	Soybean	plastid	54.21	57.43
KRH10659	Soybean	plastid	54.21	56.86
PGSC0003DMT400008074	Potato	plastid	47.66	56.04
TraesCS1A01G252400.1	Wheat	mitochondrion, plastid	54.67	54.42
Zm00001d010336_P001	Maize	mitochondrion	54.21	53.46
EES18201	Sorghum	mitochondrion	53.74	52.75
TraesCS1D01G252100.1	Wheat	mitochondrion, plastid	52.34	51.61
TraesCS1B01G265600.1	Wheat	mitochondrion, plastid	51.87	50.68
Os05t0404200-01	Rice	plasma membrane	53.27	49.78
Bra039683.1-P	Field mustard	plastid	27.57	28.92

Protein Annotations

Gene3D:2.170.150.20	MapMan:35.1	EnsemblPlantsGene:Bra013565	EnsemblPlants:Bra013565.1	EnsemblPlants:Bra013565.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016671	GO:GO:0019538	GO:GO:0030091	GO:GO:0033743	GO:GO:0055114	InterPro:IPR002579
UniProt:M4DAQ5	InterPro:Met_Sox_Rdtase	InterPro:Met_Sox_Rdtase_MsrB	InterPro:Mss4-like_sf	PFAM:PF01641	PFscan:PS51790
PANTHER:PTHR10173	PANTHER:PTHR10173:SF52	SUPFAM:SSF51316	TIGRFAMs:TIGR00357	UniParc:UPI0002547171	SEG:seg

Description

AT4G21860 (E=2e-079) MSRB2 | MSRB2 (methionine sulfoxide reductase B 2); peptide-methionine-(S)-S-oxide reductase

Coordinates

chrA01:-:6368005..6368858

Molecular Weight (calculated)

22900.1 Da

IEP (calculated)

8.693

GRAVY (calculated)

-0.293

Length

214 amino acids

Sequence
(BLAST)

001: MALNVISSAS SSATSISMTF ASTTIRAFVR PSLSLRTTPF ACSHSNPNLL PLSASPSSFP PLRLRSRGFH GGRVKAMASP APGSVNKPEE EWRAILSPEQ
101: FRILRQKGTE YPGTGEYNKL FEDGIYSCAG CGTPLYKSAT KFDSGCGWPA FFDGLPGAIN RTPDPDGRRI EITCAACGGH LGHVFKGEGF PTPTDERHCV
201: NSVSLKFAPG NQDL

Best Arabidopsis Sequence Match ( AT4G21860.3 )
(BLAST)

001: MAFNIITPGR VYSATSLTFV STIKAAFVKP PLASPSRRNL LRFSSSPLSF PSLRRGFHGG RIVAMGSSAP ESVNKPEEEW RAILSPEQFR ILRQKGTEYP
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL

Arabidopsis Description

MSRB2Peptide methionine sulfoxide reductase B2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.