Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 2
- mitochondrion 2
- peroxisome 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_03s0038g04360.t01 | |
| VIT_17s0000g06020.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G04800.1 | VIT_03s0038g04360.t01 | AT1G22920.1 | 21798944 |
| AT4G04800.1 | VIT_17s0000g06020.t01 | AT3G47620.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P05970_001 | Banana | cytosol | 58.38 | 84.56 |
| VIT_05s0020g02340.t01 | Wine grape | cytosol | 57.36 | 81.88 |
| AT4G04830.1 | Thale cress | cytosol | 55.33 | 78.42 |
| CDX94577 | Canola | cytosol | 52.79 | 76.47 |
| AT4G04810.1 | Thale cress | cytosol | 51.27 | 72.66 |
| CDY21318 | Canola | cytosol | 50.25 | 69.72 |
| CDX90878 | Canola | cytosol | 50.25 | 69.72 |
| Bra000806.1-P | Field mustard | cytosol | 49.75 | 69.01 |
| Bra020868.1-P | Field mustard | cytosol, plastid | 49.75 | 68.06 |
| CDY27421 | Canola | cytosol, plastid | 49.75 | 68.06 |
| CDX76396 | Canola | cytosol, plastid | 49.75 | 68.06 |
| AT4G04800.1 | Thale cress | extracellular, plasma membrane, vacuole | 58.38 | 65.34 |
| AT4G21830.1 | Thale cress | cytosol | 47.72 | 65.28 |
| AT4G21840.1 | Thale cress | cytosol | 47.21 | 65.03 |
| AT4G21850.1 | Thale cress | cytosol | 45.69 | 62.94 |
| Solyc10g047930.1.1 | Tomato | plastid | 61.93 | 61.93 |
| PGSC0003DMT400068883 | Potato | cytosol | 62.44 | 61.5 |
| Solyc01g106400.2.1 | Tomato | plastid | 53.3 | 61.4 |
| KRH21686 | Soybean | plastid | 62.44 | 60.89 |
| KRH10659 | Soybean | plastid | 62.94 | 60.78 |
| AT4G04840.1 | Thale cress | cytosol | 45.69 | 58.82 |
| PGSC0003DMT400008074 | Potato | plastid | 52.79 | 57.14 |
| CDX82871 | Canola | plastid | 57.87 | 57.0 |
| AT4G21860.1 | Thale cress | plastid | 57.87 | 56.44 |
| CDX94059 | Canola | plastid | 60.41 | 56.4 |
| Bra038753.1-P | Field mustard | plastid | 58.88 | 56.04 |
| CDY16645 | Canola | mitochondrion, plastid | 42.64 | 55.63 |
| TraesCS1A01G252400.1 | Wheat | mitochondrion, plastid | 60.41 | 55.35 |
| CDX98708 | Canola | plastid | 58.38 | 54.5 |
| TraesCS1D01G252100.1 | Wheat | mitochondrion, plastid | 59.9 | 54.38 |
| Bra013565.1-P | Field mustard | plastid | 58.38 | 53.74 |
| CDX79099 | Canola | plastid | 57.36 | 53.3 |
| Zm00001d010336_P001 | Maize | mitochondrion | 58.38 | 53.0 |
| TraesCS1B01G265600.1 | Wheat | mitochondrion, plastid | 58.88 | 52.97 |
| Os05t0404200-01 | Rice | plasma membrane | 60.91 | 52.4 |
| EES18201 | Sorghum | mitochondrion | 57.36 | 51.83 |
| VIT_19s0014g00170.t01 | Wine grape | plastid | 33.5 | 33.33 |
Protein Annotations
| EntrezGene:100264443 | wikigene:100264443 | Gene3D:2.170.150.20 | MapMan:35.1 | EMBL:AM457374 | ProteinID:CAN83184 |
| ProteinID:CAN83184.1 | ProteinID:CCB60729 | ProteinID:CCB60729.1 | UniProt:F6I1B3 | EMBL:FN596509 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 | GO:GO:0033743 | GO:GO:0055114 | InterPro:IPR002579 |
| EntrezGene:LOC100264443 | wikigene:LOC100264443 | InterPro:Met_Sox_Rdtase | InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf | PFAM:PF01641 |
| PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF52 | SUPFAM:SSF51316 | TIGR:TC54730 | TIGRFAMs:TIGR00357 |
| UniParc:UPI000210AA8D | ArrayExpress:VIT_00s0282g00010 | EnsemblPlantsGene:VIT_00s0282g00010 | EnsemblPlants:VIT_00s0282g00010.t01 | RefSeq:XP_002265129 | RefSeq:XP_002265129.2 |
Description
No Description!
Coordinates
chrUn:+:21016628..21022852
Molecular Weight (calculated)
21513.6 Da
IEP (calculated)
9.464
GRAVY (calculated)
-0.385
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNVLKLSP FSFSKTLVFP KTMFSKLLPS PQFTSFSPKT NYAGGLRLSL PRSKRNFVAM AGPGSVQKSD EEWRAVLSPE QFRILRRKGT EYPGTGEYDK
101: FFEEGVYNCA GCGTPLYKST TKFNSGCGWP AFYEGLPGAI NRTPDPDGMR IEITCAACGG HLGHVFKGEG FPTPTNERHC VNSISLKFTP ANSSSSL
101: FFEEGVYNCA GCGTPLYKST TKFNSGCGWP AFYEGLPGAI NRTPDPDGMR IEITCAACGG HLGHVFKGEG FPTPTNERHC VNSISLKFTP ANSSSSL
001: MAFNIITPGR VYSATSLTFV STIKAAFVKP PLASPSRRNL LRFSSSPLSF PSLRRGFHGG RIVAMGSSAP ESVNKPEEEW RAILSPEQFR ILRQKGTEYP
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL
Arabidopsis Description
MSRB2Peptide methionine sulfoxide reductase B2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.