Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90878 | Canola | cytosol | 97.18 | 97.18 |
| AT4G04830.1 | Thale cress | cytosol | 83.8 | 85.61 |
| AT4G04810.1 | Thale cress | cytosol | 80.99 | 82.73 |
| GSMUA_Achr8P05970_001 | Banana | cytosol | 73.24 | 76.47 |
| CDX94577 | Canola | cytosol | 67.61 | 70.59 |
| CDY27421 | Canola | cytosol, plastid | 63.38 | 62.5 |
| CDX76396 | Canola | cytosol, plastid | 63.38 | 62.5 |
| Solyc01g106400.2.1 | Tomato | plastid | 64.08 | 53.22 |
| Solyc10g047930.1.1 | Tomato | plastid | 71.83 | 51.78 |
| CDX82871 | Canola | plastid | 72.54 | 51.5 |
| PGSC0003DMT400068883 | Potato | cytosol | 72.54 | 51.5 |
| VIT_00s0282g00010.t01 | Wine grape | plastid | 69.72 | 50.25 |
| PGSC0003DMT400008074 | Potato | plastid | 63.38 | 49.45 |
| CDX79099 | Canola | plastid | 73.24 | 49.06 |
| KRH10659 | Soybean | plastid | 69.72 | 48.53 |
| KRH21686 | Soybean | plastid | 69.01 | 48.51 |
| CDX98708 | Canola | plastid | 71.83 | 48.34 |
| CDX94059 | Canola | plastid | 70.42 | 47.39 |
| CDY16645 | Canola | mitochondrion, plastid | 50.0 | 47.02 |
| TraesCS1A01G252400.1 | Wheat | mitochondrion, plastid | 67.61 | 44.65 |
| Zm00001d010336_P001 | Maize | mitochondrion | 67.61 | 44.24 |
| TraesCS1D01G252100.1 | Wheat | mitochondrion, plastid | 67.61 | 44.24 |
| TraesCS1B01G265600.1 | Wheat | mitochondrion, plastid | 67.61 | 43.84 |
| EES18201 | Sorghum | mitochondrion | 66.9 | 43.58 |
| Os05t0404200-01 | Rice | plasma membrane | 68.31 | 42.36 |
| CDY45127 | Canola | plastid | 35.92 | 25.0 |
| CDY24080 | Canola | plastid | 35.92 | 25.0 |
Protein Annotations
| Gene3D:2.170.150.20 | MapMan:35.1 | GO:A0A078G998 | UniProt:A0A078G998 | EnsemblPlants:CDY21318 | ProteinID:CDY21318 |
| ProteinID:CDY21318.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 | GO:GO:0033743 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00015659001 | InterPro:IPR002579 | InterPro:Met_Sox_Rdtase | InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf |
| PFAM:PF01641 | PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF46 | SUPFAM:SSF51316 | TIGRFAMs:TIGR00357 |
| UniParc:UPI0001CA922B | : | : | : | : | : |
Description
BnaC03g30020DBnaC03g30020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G998]
Coordinates
chrLK032119:+:549467..550485
Molecular Weight (calculated)
15624.2 Da
IEP (calculated)
4.707
GRAVY (calculated)
-0.586
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAHGRVVQ KTEEEWRAIL SPEQFRILRQ KGTEIPGTGE YDKFFEDGIF SCVGCKTPLY KSTTKFDSGC GWPAFFEGLP GAINRAPDPD GRSTEITCAV
101: CDGHLGHVTK GEGYDTPTDE RHCVNSVSII FNPQKPPEEA ED
101: CDGHLGHVTK GEGYDTPTDE RHCVNSVSII FNPQKPPEEA ED
001: MAASPLVVQK TEEEWRAVLS PEQFRILRQK GTEKPGTGEY DKFFEEGIFD CVGCKTPLYK STTKFDSGCG WPAFFEGLPG AINRTPDPDG RRTEITCAAC
101: DGHLGHVFKG EGYGNPTDER HCVNSVSISF NPAKSSSII
101: DGHLGHVFKG EGYGNPTDER HCVNSVSISF NPAKSSSII
Arabidopsis Description
MSRB5Peptide methionine sulfoxide reductase B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.