Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_05s0020g02340.t01 | Wine grape | cytosol | 83.09 | 81.88 |
Solyc01g080410.2.1 | Tomato | cytosol | 79.41 | 80.0 |
KRH11321 | Soybean | cytosol | 80.15 | 78.99 |
KRH20953 | Soybean | cytosol | 78.68 | 77.54 |
CDX94577 | Canola | cytosol | 77.21 | 77.21 |
AT4G04830.1 | Thale cress | cytosol | 78.68 | 76.98 |
CDY21318 | Canola | cytosol | 76.47 | 73.24 |
CDX90878 | Canola | cytosol | 75.74 | 72.54 |
Bra000806.1-P | Field mustard | cytosol | 75.0 | 71.83 |
AT4G04810.1 | Thale cress | cytosol | 72.79 | 71.22 |
AT4G21850.1 | Thale cress | cytosol | 67.65 | 64.34 |
Bra020868.1-P | Field mustard | cytosol, plastid | 66.91 | 63.19 |
CDX76396 | Canola | cytosol, plastid | 66.91 | 63.19 |
CDY27421 | Canola | cytosol, plastid | 66.91 | 63.19 |
AT4G21840.1 | Thale cress | cytosol | 65.44 | 62.24 |
AT4G21830.1 | Thale cress | cytosol | 65.44 | 61.81 |
AT4G04800.1 | Thale cress | extracellular, plasma membrane, vacuole | 77.94 | 60.23 |
Solyc01g106400.2.1 | Tomato | plastid | 75.0 | 59.65 |
VIT_00s0282g00010.t01 | Wine grape | plastid | 84.56 | 58.38 |
PGSC0003DMT400068883 | Potato | cytosol | 84.56 | 57.5 |
CDX82871 | Canola | plastid | 83.82 | 57.0 |
Solyc10g047930.1.1 | Tomato | plastid | 82.35 | 56.85 |
AT4G21860.1 | Thale cress | plastid | 83.82 | 56.44 |
AT4G04840.1 | Thale cress | cytosol | 63.24 | 56.21 |
PGSC0003DMT400008074 | Potato | plastid | 73.53 | 54.95 |
CDY16645 | Canola | mitochondrion, plastid | 60.29 | 54.3 |
Bra038753.1-P | Field mustard | plastid | 82.35 | 54.11 |
TraesCS1A01G252400.1 | Wheat | mitochondrion, plastid | 85.29 | 53.95 |
KRH21686 | Soybean | plastid | 79.41 | 53.47 |
TraesCS1D01G252100.1 | Wheat | mitochondrion, plastid | 85.29 | 53.46 |
CDX79099 | Canola | plastid | 83.09 | 53.3 |
Bra013565.1-P | Field mustard | plastid | 83.82 | 53.27 |
CDX98708 | Canola | plastid | 82.35 | 53.08 |
KRH10659 | Soybean | plastid | 79.41 | 52.94 |
TraesCS1B01G265600.1 | Wheat | mitochondrion, plastid | 84.56 | 52.51 |
CDX94059 | Canola | plastid | 80.88 | 52.13 |
Os05t0404200-01 | Rice | plasma membrane | 85.29 | 50.66 |
EES18201 | Sorghum | mitochondrion | 80.15 | 50.0 |
Zm00001d010336_P001 | Maize | mitochondrion | 78.68 | 49.31 |
GSMUA_Achr6P13640_001 | Banana | cytosol | 38.97 | 35.81 |
Protein Annotations
Gene3D:2.170.150.20 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006950 | GO:GO:0006979 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 |
GO:GO:0033743 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr8G05970_001 | EnsemblPlants:GSMUA_Achr8P05970_001 | EnsemblPlants:GSMUA_Achr8T05970_001 | InterPro:IPR002579 |
UniProt:M0TN00 | InterPro:Met_Sox_Rdtase | InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf | PFAM:PF01641 | PFscan:PS51790 |
PANTHER:PTHR10173 | PANTHER:PTHR10173:SF52 | SUPFAM:SSF51316 | TIGRFAMs:TIGR00357 | UniParc:UPI00029543AC | : |
Description
Peptide methionine sulfoxide reductase B3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G05970_001]
Coordinates
chr8:-:3870795..3873913
Molecular Weight (calculated)
14758.2 Da
IEP (calculated)
6.237
GRAVY (calculated)
-0.492
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSGPVQKS EEEWQAILSP EQFRILRSKG TEYPGTGQYD KFFADGIYEC AGCGTPLYKS TTKFNSGCGW PAFFEGLPGA INRTPDPDGR RIEITCAACG
101: GHLGHVFKGE GFNTPTDERH CVNSISLKFV PASQSN
101: GHLGHVFKGE GFNTPTDERH CVNSISLKFV PASQSN
001: MAFNIITPGR VYSATSLTFV STIKAAFVKP PLASPSRRNL LRFSSSPLSF PSLRRGFHGG RIVAMGSSAP ESVNKPEEEW RAILSPEQFR ILRQKGTEYP
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL
Arabidopsis Description
MSRB2Peptide methionine sulfoxide reductase B2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.