Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P05970_001 | Banana | cytosol | 77.21 | 77.21 |
| CDY21318 | Canola | cytosol | 70.59 | 67.61 |
| CDX90878 | Canola | cytosol | 69.85 | 66.9 |
| CDY16645 | Canola | mitochondrion, plastid | 73.53 | 66.23 |
| AT4G04800.1 | Thale cress | extracellular, plasma membrane, vacuole | 85.29 | 65.91 |
| CDX76396 | Canola | cytosol, plastid | 68.38 | 64.58 |
| CDY27421 | Canola | cytosol, plastid | 68.38 | 64.58 |
| PGSC0003DMT400068883 | Potato | cytosol | 77.94 | 53.0 |
| VIT_00s0282g00010.t01 | Wine grape | plastid | 76.47 | 52.79 |
| Solyc10g047930.1.1 | Tomato | plastid | 76.47 | 52.79 |
| Solyc01g106400.2.1 | Tomato | plastid | 65.44 | 52.05 |
| CDX94059 | Canola | plastid | 79.41 | 51.18 |
| CDX82871 | Canola | plastid | 75.0 | 51.0 |
| CDX98708 | Canola | plastid | 77.94 | 50.24 |
| KRH21686 | Soybean | plastid | 74.26 | 50.0 |
| KRH10659 | Soybean | plastid | 73.53 | 49.02 |
| PGSC0003DMT400008074 | Potato | plastid | 65.44 | 48.9 |
| CDX79099 | Canola | plastid | 75.74 | 48.58 |
| TraesCS1D01G252100.1 | Wheat | mitochondrion, plastid | 75.74 | 47.47 |
| TraesCS1A01G252400.1 | Wheat | mitochondrion, plastid | 75.0 | 47.44 |
| TraesCS1B01G265600.1 | Wheat | mitochondrion, plastid | 75.0 | 46.58 |
| Os05t0404200-01 | Rice | plasma membrane | 74.26 | 44.1 |
| Zm00001d010336_P001 | Maize | mitochondrion | 69.12 | 43.32 |
| EES18201 | Sorghum | mitochondrion | 69.12 | 43.12 |
| CDY45127 | Canola | plastid | 37.5 | 25.0 |
| CDY24080 | Canola | plastid | 37.5 | 25.0 |
Protein Annotations
| Gene3D:2.170.150.20 | MapMan:35.1 | GO:A0A078E0A9 | EnsemblPlants:CDX94577 | ProteinID:CDX94577 | ProteinID:CDX94577.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 | GO:GO:0033743 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00157856001 | InterPro:IPR002579 | InterPro:Met_Sox_Rdtase | InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf | PFAM:PF01641 |
| PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF46 | SUPFAM:SSF51316 | TIGRFAMs:TIGR00357 | UniParc:UPI0004EE27EC |
Description
BnaC09g22590D
Coordinates
chrLK031882:+:1321803..1323047
Molecular Weight (calculated)
14789.5 Da
IEP (calculated)
6.245
GRAVY (calculated)
-0.428
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEGSMQKG EEEWRAVLSP EQLRILRLKG TEYPGTGEYI DFNKEGIYGC ARCKTPLYKS TTKFNAGCGW PAFFDGIPGA ITRTADPDGR RIEINCAACG
101: GHLGHVFKGE GFATPTDERH CVNSVSLNFT PAEPSL
101: GHLGHVFKGE GFATPTDERH CVNSVSLNFT PAEPSL
001: MNIVNSKILF LSFTLLLLLQ SSIVESDSIC LSSGVASTVA MAAPGSVQKG DEEWRAILSP EQFRILRQKG TEYPGTGEYV NFDKEGVYGC VGCNAPLYKS
101: TTKFNAGCGW PAFFEGIPGA ITRTTDPDGR RIEINCATCG GHLGHVFKGE GFATPTDERH CVNSVSLKFT PAASSL
101: TTKFNAGCGW PAFFEGIPGA ITRTTDPDGR RIEINCATCG GHLGHVFKGE GFATPTDERH CVNSVSLKFT PAASSL
Arabidopsis Description
MSRB3Peptide methionine sulfoxide reductase B3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0Z6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.