Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020868.1-P | Field mustard | cytosol, plastid | 100.0 | 100.0 |
| CDY27421 | Canola | cytosol, plastid | 99.31 | 99.31 |
| AT4G21850.1 | Thale cress | cytosol | 78.47 | 79.02 |
| AT4G21830.1 | Thale cress | cytosol | 75.69 | 75.69 |
| AT4G21840.1 | Thale cress | cytosol | 75.0 | 75.52 |
| CDX94577 | Canola | cytosol | 64.58 | 68.38 |
| GSMUA_Achr8P05970_001 | Banana | cytosol | 63.19 | 66.91 |
| CDX90878 | Canola | cytosol | 62.5 | 63.38 |
| CDY21318 | Canola | cytosol | 62.5 | 63.38 |
| Solyc01g106400.2.1 | Tomato | plastid | 60.42 | 50.88 |
| VIT_00s0282g00010.t01 | Wine grape | plastid | 68.06 | 49.75 |
| CDX82871 | Canola | plastid | 68.75 | 49.5 |
| CDX94059 | Canola | plastid | 70.14 | 47.87 |
| Solyc10g047930.1.1 | Tomato | plastid | 65.28 | 47.72 |
| PGSC0003DMT400068883 | Potato | cytosol | 65.97 | 47.5 |
| PGSC0003DMT400008074 | Potato | plastid | 59.72 | 47.25 |
| CDX79099 | Canola | plastid | 69.44 | 47.17 |
| CDX98708 | Canola | plastid | 68.75 | 46.92 |
| CDY16645 | Canola | mitochondrion, plastid | 48.61 | 46.36 |
| KRH21686 | Soybean | plastid | 63.89 | 45.54 |
| KRH10659 | Soybean | plastid | 63.89 | 45.1 |
| TraesCS1A01G252400.1 | Wheat | mitochondrion, plastid | 66.67 | 44.65 |
| TraesCS1D01G252100.1 | Wheat | mitochondrion, plastid | 66.67 | 44.24 |
| TraesCS1B01G265600.1 | Wheat | mitochondrion, plastid | 65.97 | 43.38 |
| Zm00001d010336_P001 | Maize | mitochondrion | 63.89 | 42.4 |
| Os05t0404200-01 | Rice | plasma membrane | 67.36 | 42.36 |
| EES18201 | Sorghum | mitochondrion | 63.19 | 41.74 |
| CDY45127 | Canola | plastid | 34.72 | 24.51 |
| CDY24080 | Canola | plastid | 34.72 | 24.51 |
Protein Annotations
| Gene3D:2.170.150.20 | MapMan:35.1 | GO:A0A078CGQ3 | EnsemblPlants:CDX76396 | ProteinID:CDX76396 | ProteinID:CDX76396.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 | GO:GO:0033743 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00126790001 | InterPro:IPR002579 | InterPro:Met_Sox_Rdtase | InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf | PFAM:PF01641 |
| PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF52 | SUPFAM:SSF51316 | TIGRFAMs:TIGR00357 | UniParc:UPI0002545C25 |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g10040D
Coordinates
chrLK031807:+:927204..928418
Molecular Weight (calculated)
15617.2 Da
IEP (calculated)
6.101
GRAVY (calculated)
-0.449
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTATSAAP SPGSVQKHDE EWRAVLSPEQ FRVLREKGTE ARFKGEYTKL FEEGTYACAG CATPLYKSTT KFDSGCGWPA FFDAIPGAII QTLEPDGKRV
101: EITCAKCDGH LGHVFKGEGF PTATDERHCV NSVSLKFNSS ETSS
101: EITCAKCDGH LGHVFKGEGF PTATDERHCV NSVSLKFNSS ETSS
001: MPTSATAVAP STGSVQKKDQ DWRAILSPEQ FRVLREKGTE NRGKGEYTKL FDDGIYSCAG CATPLYKSTT KFDSGCGWPS FFDAIPGAIK QTPEAGGRRM
101: EITCAACDGH LGHVVKGEGF PTATDERHCV NSVSLKFSEI SSQ
101: EITCAACDGH LGHVVKGEGF PTATDERHCV NSVSLKFSEI SSQ
Arabidopsis Description
MSRB9MSRB9 [Source:UniProtKB/TrEMBL;Acc:A0A178V287]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.