Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020868.1-P | Field mustard | cytosol, plastid | 79.02 | 78.47 |
| CDX76396 | Canola | cytosol, plastid | 79.02 | 78.47 |
| CDY27421 | Canola | cytosol, plastid | 78.32 | 77.78 |
| AT4G21830.1 | Thale cress | cytosol | 76.22 | 75.69 |
| AT4G21840.1 | Thale cress | cytosol | 74.83 | 74.83 |
| GSMUA_Achr8P05970_001 | Banana | cytosol | 64.34 | 67.65 |
| AT4G04830.1 | Thale cress | cytosol | 62.24 | 64.03 |
| AT4G04810.1 | Thale cress | cytosol | 60.14 | 61.87 |
| AT4G04840.1 | Thale cress | cytosol | 62.94 | 58.82 |
| AT4G04800.1 | Thale cress | extracellular, plasma membrane, vacuole | 62.24 | 50.57 |
| Solyc01g106400.2.1 | Tomato | plastid | 60.14 | 50.29 |
| AT4G21860.1 | Thale cress | plastid | 68.53 | 48.51 |
| Solyc10g047930.1.1 | Tomato | plastid | 65.03 | 47.21 |
| PGSC0003DMT400068883 | Potato | cytosol | 65.73 | 47.0 |
| PGSC0003DMT400008074 | Potato | plastid | 58.74 | 46.15 |
| VIT_00s0282g00010.t01 | Wine grape | plastid | 62.94 | 45.69 |
| KRH21686 | Soybean | plastid | 61.54 | 43.56 |
| TraesCS1A01G252400.1 | Wheat | mitochondrion, plastid | 65.03 | 43.26 |
| KRH10659 | Soybean | plastid | 60.84 | 42.65 |
| TraesCS1B01G265600.1 | Wheat | mitochondrion, plastid | 64.34 | 42.01 |
| TraesCS1D01G252100.1 | Wheat | mitochondrion, plastid | 63.64 | 41.94 |
| Os05t0404200-01 | Rice | plasma membrane | 66.43 | 41.48 |
| EES18201 | Sorghum | mitochondrion | 62.24 | 40.83 |
| Zm00001d010336_P001 | Maize | mitochondrion | 60.84 | 40.09 |
| AT1G53670.1 | Thale cress | plastid | 34.97 | 24.75 |
Protein Annotations
| Gene3D:2.170.150.20 | MapMan:35.1 | EntrezGene:828273 | UniProt:A0A178V287 | ProteinID:AEE84511.1 | ProteinID:AEE84512.1 |
| ArrayExpress:AT4G21850 | EnsemblPlantsGene:AT4G21850 | RefSeq:AT4G21850 | TAIR:AT4G21850 | RefSeq:AT4G21850-TAIR-G | EnsemblPlants:AT4G21850.1 |
| TAIR:AT4G21850.1 | Symbol:ATMSRB9 | EMBL:AY086368 | Unigene:At.22710 | EMBL:BT004230 | EMBL:BT005691 |
| ProteinID:CAA17152.1 | ProteinID:CAB79140.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0006979 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016671 | GO:GO:0019538 |
| GO:GO:0030091 | GO:GO:0033743 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR002579 | InterPro:Met_Sox_Rdtase |
| InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf | RefSeq:NP_567638.1 | RefSeq:NP_849418.1 | ProteinID:OAP00329.1 | PFAM:PF01641 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF52 | UniProt:Q84JT6 | SUPFAM:SSF51316 |
| TIGRFAMs:TIGR00357 | UniParc:UPI000000C2F6 | : | : | : | : |
Description
MSRB9MSRB9 [Source:UniProtKB/TrEMBL;Acc:A0A178V287]
Coordinates
chr4:-:11591116..11592425
Molecular Weight (calculated)
15413.1 Da
IEP (calculated)
7.304
GRAVY (calculated)
-0.477
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTSATAVAP STGSVQKKDQ DWRAILSPEQ FRVLREKGTE NRGKGEYTKL FDDGIYSCAG CATPLYKSTT KFDSGCGWPS FFDAIPGAIK QTPEAGGRRM
101: EITCAACDGH LGHVVKGEGF PTATDERHCV NSVSLKFSEI SSQ
101: EITCAACDGH LGHVVKGEGF PTATDERHCV NSVSLKFSEI SSQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.