Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g062060.2.1 | Tomato | plastid | 53.96 | 73.65 |
| GSMUA_Achr6P13640_001 | Banana | cytosol | 53.96 | 73.65 |
| PGSC0003DMT400018250 | Potato | cytosol | 52.97 | 72.3 |
| CDY45127 | Canola | plastid | 63.37 | 62.75 |
| Bra039683.1-P | Field mustard | plastid | 62.87 | 62.25 |
| CDY24080 | Canola | plastid | 62.87 | 62.25 |
| VIT_19s0014g00170.t01 | Wine grape | plastid | 57.43 | 58.59 |
| Zm00001d037273_P001 | Maize | plastid | 56.44 | 54.55 |
| TraesCS7B01G247500.2 | Wheat | plastid | 52.97 | 54.31 |
| KRH44863 | Soybean | plastid | 53.96 | 53.96 |
| TraesCS7D01G343600.2 | Wheat | plastid | 52.48 | 53.81 |
| Os06t0472000-01 | Rice | plastid | 55.94 | 53.3 |
| EER88155 | Sorghum | plastid | 53.47 | 48.87 |
| HORVU7Hr1G082710.2 | Barley | plastid | 54.95 | 48.05 |
| AT4G04830.1 | Thale cress | cytosol | 27.23 | 39.57 |
| AT4G04810.1 | Thale cress | cytosol | 24.75 | 35.97 |
| AT4G21850.1 | Thale cress | cytosol | 24.75 | 34.97 |
| AT4G21840.1 | Thale cress | cytosol | 24.26 | 34.27 |
| AT4G21830.1 | Thale cress | cytosol | 24.26 | 34.03 |
| AT4G04800.1 | Thale cress | extracellular, plasma membrane, vacuole | 28.22 | 32.39 |
| AT4G04840.1 | Thale cress | cytosol | 22.77 | 30.07 |
| AT4G21860.1 | Thale cress | plastid | 29.7 | 29.7 |
Protein Annotations
| Gene3D:2.170.150.20 | MapMan:35.1 | EntrezGene:841804 | ProteinID:AAG51964.1 | ProteinID:AEE32979.1 | ProteinID:AEE32980.1 |
| EMBL:AK117314 | ArrayExpress:AT1G53670 | EnsemblPlantsGene:AT1G53670 | RefSeq:AT1G53670 | TAIR:AT1G53670 | RefSeq:AT1G53670-TAIR-G |
| EnsemblPlants:AT1G53670.1 | TAIR:AT1G53670.1 | EMBL:AY087664 | Unigene:At.37365 | EMBL:BT030636 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009570 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 |
| GO:GO:0033743 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR002579 | Symbol:MSRB1 | InterPro:Met_Sox_Rdtase |
| InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf | RefSeq:NP_001117484.1 | RefSeq:NP_564640.2 | PFAM:PF01641 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000056 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF37 | UniProt:Q9C8M2 | SUPFAM:SSF51316 | TIGRFAMs:TIGR00357 |
| UniParc:UPI00000A6547 | SEG:seg | : | : | : | : |
Description
MSRB1Peptide methionine sulfoxide reductase B1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M2]
Coordinates
chr1:+:20036631..20038261
Molecular Weight (calculated)
22608.6 Da
IEP (calculated)
9.203
GRAVY (calculated)
-0.593
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSTRLTII QSSFVSARTR LNYVSKTNHS GFACRSLSKP RNLSLSVYSM GSSSSSPKPD NVQEAEKNEF ASLSENEWKK RLTPEQYYIT RQKGTERAFT
101: GEYWNSKTPG VYNCVCCDTP LFDSSTKFDS GTGWPSYYQP IGNNVKTKLD LSIIFMPRQE VVCAVCNAHL GHVFDDGPRP TGKRYCLNSA ALKLNALEKT
201: RD
101: GEYWNSKTPG VYNCVCCDTP LFDSSTKFDS GTGWPSYYQP IGNNVKTKLD LSIIFMPRQE VVCAVCNAHL GHVFDDGPRP TGKRYCLNSA ALKLNALEKT
201: RD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.