Factsheet for Bra039683.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24080	Canola	plastid	100.0	100.0
CDY45127	Canola	plastid	98.04	98.04
Solyc07g062060.2.1	Tomato	plastid	57.84	79.73
GSMUA_Achr6P13640_001	Banana	cytosol	57.35	79.05
PGSC0003DMT400018250	Potato	cytosol	56.86	78.38
VIT_19s0014g00170.t01	Wine grape	plastid	61.76	63.64
AT1G53670.1	Thale cress	plastid	62.25	62.87
TraesCS7B01G247500.2	Wheat	plastid	57.35	59.39
TraesCS7D01G343600.2	Wheat	plastid	56.86	58.88
Os06t0472000-01	Rice	plastid	58.33	56.13
KRH44863	Soybean	plastid	54.41	54.95
Zm00001d037273_P001	Maize	plastid	54.41	53.11
EER88155	Sorghum	plastid	53.43	49.32
HORVU7Hr1G082710.2	Barley	plastid	55.39	48.92
Bra000806.1-P	Field mustard	cytosol	25.0	35.92
Bra020868.1-P	Field mustard	cytosol, plastid	24.51	34.72
Bra038753.1-P	Field mustard	plastid	29.41	28.99
Bra013565.1-P	Field mustard	plastid	28.92	27.57

Protein Annotations

Gene3D:2.170.150.20	MapMan:35.1	EnsemblPlantsGene:Bra039683	EnsemblPlants:Bra039683.1	EnsemblPlants:Bra039683.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016671	GO:GO:0019538	GO:GO:0030091	GO:GO:0033743	GO:GO:0055114
InterPro:IPR002579	UniProt:M4FF11	InterPro:Met_Sox_Rdtase	InterPro:Met_Sox_Rdtase_MsrB	InterPro:Mss4-like_sf	PFAM:PF01641
PFscan:PS51790	PANTHER:PTHR10173	PANTHER:PTHR10173:SF37	SUPFAM:SSF51316	TIGRFAMs:TIGR00357	UniParc:UPI000253E785

Description

AT1G53670 (E=5e-096) MSRB1, ATMSRB1 | MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase

Coordinates

chrA06:+:554013..555359

Molecular Weight (calculated)

22818.0 Da

IEP (calculated)

9.120

GRAVY (calculated)

-0.485

Length

204 amino acids

Sequence
(BLAST)

001: MASSSCFTIQ SRFVSARTKL DSISKPSLSG FACRSLTKPR NLNLSVLLRC SMGSFNSSQK SDNVQEAAKS DFASISEGEW KKRLTPEQYY ITRQKGTERA
101: FTGEYWNTKT PGVYKCICCD TPLFDSSTKF DSGTGWPSYY QPIGNNVKSK LDLSIIFMPR QEVICAVCNA HLGHVFDDGP RPTGKRYCLN SAALKLESLE
201: RTRE

Best Arabidopsis Sequence Match ( AT1G53670.1 )
(BLAST)

001: MASSTRLTII QSSFVSARTR LNYVSKTNHS GFACRSLSKP RNLSLSVYSM GSSSSSPKPD NVQEAEKNEF ASLSENEWKK RLTPEQYYIT RQKGTERAFT
101: GEYWNSKTPG VYNCVCCDTP LFDSSTKFDS GTGWPSYYQP IGNNVKTKLD LSIIFMPRQE VVCAVCNAHL GHVFDDGPRP TGKRYCLNSA ALKLNALEKT
201: RD

Arabidopsis Description

MSRB1Peptide methionine sulfoxide reductase B1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.