Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018250 | Potato | cytosol | 65.66 | 87.84 |
| Solyc07g062060.2.1 | Tomato | plastid | 65.15 | 87.16 |
| GSMUA_Achr6P13640_001 | Banana | cytosol | 64.65 | 86.49 |
| TraesCS7B01G247500.2 | Wheat | plastid | 61.62 | 61.93 |
| TraesCS7D01G343600.2 | Wheat | plastid | 61.62 | 61.93 |
| Bra039683.1-P | Field mustard | plastid | 63.64 | 61.76 |
| CDY24080 | Canola | plastid | 63.64 | 61.76 |
| CDY45127 | Canola | plastid | 63.64 | 61.76 |
| KRH44863 | Soybean | plastid | 61.11 | 59.9 |
| Zm00001d037273_P001 | Maize | plastid | 62.63 | 59.33 |
| AT1G53670.1 | Thale cress | plastid | 58.59 | 57.43 |
| Os06t0472000-01 | Rice | plastid | 60.61 | 56.6 |
| HORVU7Hr1G082710.2 | Barley | plastid | 63.13 | 54.11 |
| EER88155 | Sorghum | plastid | 57.07 | 51.13 |
| VIT_05s0020g02340.t01 | Wine grape | cytosol | 27.78 | 39.86 |
| VIT_00s0282g00010.t01 | Wine grape | plastid | 33.33 | 33.5 |
Protein Annotations
| EntrezGene:100267520 | wikigene:100267520 | Gene3D:2.170.150.20 | MapMan:35.1 | ProteinID:CCB46186 | ProteinID:CCB46186.1 |
| UniProt:F6H2J9 | EMBL:FN595229 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 |
| GO:GO:0033743 | GO:GO:0055114 | InterPro:IPR002579 | EntrezGene:LOC100267520 | wikigene:LOC100267520 | InterPro:Met_Sox_Rdtase |
| InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf | PFAM:PF01641 | PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF37 |
| SUPFAM:SSF51316 | TIGR:TC52860 | TIGRFAMs:TIGR00357 | UniParc:UPI0001985758 | ArrayExpress:VIT_19s0014g00170 | EnsemblPlantsGene:VIT_19s0014g00170 |
| EnsemblPlants:VIT_19s0014g00170.t01 | RefSeq:XP_002285647 | RefSeq:XP_002285647.1 | RefSeq:XP_003634669 | RefSeq:XP_003634669.1 | : |
Description
No Description!
Coordinates
chr19:-:153404..156625
Molecular Weight (calculated)
22042.0 Da
IEP (calculated)
9.573
GRAVY (calculated)
-0.583
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRSLGNLS FPTQHVSSKT QFVFGSKPQF VSFSGALRKP VRQKFSTRVM GSSASSSQKP DSIQEPGKVD YTSISDEEWK KRLTGEQFYI TRQKGTERAF
101: TGEYWNTKTP GAYHCICCDT PLFESSTKFD SGTGWPSYYQ PIGNNVKSKL DLSIIFMPRQ EVLCAACDAH LGHVFDDGPP PTGKRYCINS ASLKLKPK
101: TGEYWNTKTP GAYHCICCDT PLFESSTKFD SGTGWPSYYQ PIGNNVKSKL DLSIIFMPRQ EVLCAACDAH LGHVFDDGPP PTGKRYCINS ASLKLKPK
001: MASSTRLTII QSSFVSARTR LNYVSKTNHS GFACRSLSKP RNLSLSVYSM GSSSSSPKPD NVQEAEKNEF ASLSENEWKK RLTPEQYYIT RQKGTERAFT
101: GEYWNSKTPG VYNCVCCDTP LFDSSTKFDS GTGWPSYYQP IGNNVKTKLD LSIIFMPRQE VVCAVCNAHL GHVFDDGPRP TGKRYCLNSA ALKLNALEKT
201: RD
101: GEYWNSKTPG VYNCVCCDTP LFDSSTKFDS GTGWPSYYQP IGNNVKTKLD LSIIFMPRQE VVCAVCNAHL GHVFDDGPRP TGKRYCLNSA ALKLNALEKT
201: RD
Arabidopsis Description
MSRB1Peptide methionine sulfoxide reductase B1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.