Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g062060.2.1 | Tomato | plastid | 96.62 | 96.62 |
| GSMUA_Achr6P13640_001 | Banana | cytosol | 84.46 | 84.46 |
| VIT_19s0014g00170.t01 | Wine grape | plastid | 87.84 | 65.66 |
| TraesCS7B01G247500.2 | Wheat | plastid | 77.03 | 57.87 |
| TraesCS7D01G343600.2 | Wheat | plastid | 77.03 | 57.87 |
| Bra039683.1-P | Field mustard | plastid | 78.38 | 56.86 |
| CDY24080 | Canola | plastid | 78.38 | 56.86 |
| CDY45127 | Canola | plastid | 78.38 | 56.86 |
| KRH44863 | Soybean | plastid | 77.03 | 56.44 |
| AT1G53670.1 | Thale cress | plastid | 72.3 | 52.97 |
| Os06t0472000-01 | Rice | plastid | 75.68 | 52.83 |
| Zm00001d037273_P001 | Maize | plastid | 74.32 | 52.63 |
| EER88155 | Sorghum | plastid | 74.32 | 49.77 |
| HORVU7Hr1G082710.2 | Barley | plastid | 77.03 | 49.35 |
| PGSC0003DMT400008074 | Potato | plastid | 37.84 | 30.77 |
| PGSC0003DMT400068883 | Potato | cytosol | 39.19 | 29.0 |
Protein Annotations
| Gene3D:2.170.150.20 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 |
| GO:GO:0033743 | GO:GO:0055114 | InterPro:IPR002579 | UniProt:M1AAB1 | InterPro:Met_Sox_Rdtase | InterPro:Met_Sox_Rdtase_MsrB |
| InterPro:Mss4-like_sf | PFAM:PF01641 | EnsemblPlantsGene:PGSC0003DMG400007084 | PGSC:PGSC0003DMG400007084 | EnsemblPlants:PGSC0003DMT400018250 | PFscan:PS51790 |
| PANTHER:PTHR10173 | PANTHER:PTHR10173:SF37 | SUPFAM:SSF51316 | TIGRFAMs:TIGR00357 | UniParc:UPI000296B071 | SEG:seg |
Description
Methionine-R-sulfoxide reductase B4 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007084]
Coordinates
chr7:-:52224573..52228181
Molecular Weight (calculated)
16486.3 Da
IEP (calculated)
7.785
GRAVY (calculated)
-0.720
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSASSSKP DSAQGASKMD YSSVSDEEWK KKLTNEQFYI TRQKGTERAF TGEYWNSKTP GTYHCICCDT PLFESSTKFD SGTGWPSYYQ PIDNNVKSKM
101: DLSIIFMPRQ EVLCAACDAH LGHVFDDGPP PTGKRYCINS ASLKLKPK
101: DLSIIFMPRQ EVLCAACDAH LGHVFDDGPP PTGKRYCINS ASLKLKPK
001: MASSTRLTII QSSFVSARTR LNYVSKTNHS GFACRSLSKP RNLSLSVYSM GSSSSSPKPD NVQEAEKNEF ASLSENEWKK RLTPEQYYIT RQKGTERAFT
101: GEYWNSKTPG VYNCVCCDTP LFDSSTKFDS GTGWPSYYQP IGNNVKTKLD LSIIFMPRQE VVCAVCNAHL GHVFDDGPRP TGKRYCLNSA ALKLNALEKT
201: RD
101: GEYWNSKTPG VYNCVCCDTP LFDSSTKFDS GTGWPSYYQP IGNNVKTKLD LSIIFMPRQE VVCAVCNAHL GHVFDDGPRP TGKRYCLNSA ALKLNALEKT
201: RD
Arabidopsis Description
MSRB1Peptide methionine sulfoxide reductase B1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.